Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL8A2P25067 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.2□□□□□ -1.74
COL8A2P25067 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL8A2P25067 ATP5HP3-201ENST00000396994 486 ntBASIC4.2□□□□□ -1.74
COL8A2P25067 AL021331.1-201ENST00000402817 582 ntBASIC4.2□□□□□ -1.74
COL8A2P25067 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.2□□□□□ -1.74
COL8A2P25067 TXNP5-201ENST00000441043 315 ntBASIC4.2□□□□□ -1.74
COL8A2P25067 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.2□□□□□ -1.74
COL8A2P25067 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.2□□□□□ -1.74
COL8A2P25067 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.2□□□□□ -1.74
COL8A2P25067 PRPF38AP1-201ENST00000451976 933 ntBASIC4.2□□□□□ -1.74
COL8A2P25067 OR52E3P-201ENST00000452083 936 ntBASIC4.2□□□□□ -1.74
COL8A2P25067 HMGB1P4-201ENST00000455362 567 ntBASIC4.2□□□□□ -1.74
COL8A2P25067 RPS4XP12-201ENST00000461747 709 ntBASIC4.2□□□□□ -1.74
COL8A2P25067 AC063943.1-201ENST00000465434 453 ntBASIC4.2□□□□□ -1.74
COL8A2P25067 IGLV2-34-201ENST00000490007 283 ntBASIC4.2□□□□□ -1.74
COL8A2P25067 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC4.2□□□□□ -1.74
COL8A2P25067 GAPDHP56-201ENST00000506031 988 ntBASIC4.2□□□□□ -1.74
COL8A2P25067 AC016559.2-201ENST00000510759 359 ntBASIC4.2□□□□□ -1.74
COL8A2P25067 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.2□□□□□ -1.74
COL8A2P25067 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
COL8A2P25067 AC005377.1-201ENST00000605126 456 ntBASIC4.2□□□□□ -1.74
COL8A2P25067 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.2□□□□□ -1.74
COL8A2P25067 MIR6748-201ENST00000610433 71 ntBASIC4.2□□□□□ -1.74
COL8A2P25067 AC008833.1-201ENST00000611633 691 ntBASIC4.2□□□□□ -1.74
COL8A2P25067 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.2□□□□□ -1.74
COL8A2P25067 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
COL8A2P25067 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.2□□□□□ -1.74
COL8A2P25067 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
COL8A2P25067 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.2□□□□□ -1.74
COL8A2P25067 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
COL8A2P25067 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
COL8A2P25067 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL8A2P25067 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL8A2P25067 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.2□□□□□ -1.74
COL8A2P25067 AC003985.2-201ENST00000562268 1669 ntBASIC4.19□□□□□ -1.74
COL8A2P25067 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
COL8A2P25067 AC026523.2-201ENST00000625039 7739 ntBASIC4.19□□□□□ -1.74
COL8A2P25067 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
COL8A2P25067 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
COL8A2P25067 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.19□□□□□ -1.74
COL8A2P25067 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL8A2P25067 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
COL8A2P25067 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL8A2P25067 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.19□□□□□ -1.74
COL8A2P25067 RNA5SP191-201ENST00000362585 102 ntBASIC4.19□□□□□ -1.74
COL8A2P25067 AC007618.1-201ENST00000366455 732 ntBASIC4.19□□□□□ -1.74
COL8A2P25067 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
COL8A2P25067 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.19□□□□□ -1.74
COL8A2P25067 USP9YP9-201ENST00000429406 715 ntBASIC4.19□□□□□ -1.74
COL8A2P25067 FABP7P2-201ENST00000429946 379 ntBASIC4.19□□□□□ -1.74
COL8A2P25067 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
COL8A2P25067 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.19□□□□□ -1.74
COL8A2P25067 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.19□□□□□ -1.74
COL8A2P25067 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.19□□□□□ -1.74
COL8A2P25067 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.19□□□□□ -1.74
COL8A2P25067 AC005412.2-201ENST00000492004 341 ntBASIC4.19□□□□□ -1.74
COL8A2P25067 RN7SL441P-201ENST00000492388 296 ntBASIC4.19□□□□□ -1.74
COL8A2P25067 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.19□□□□□ -1.74
COL8A2P25067 AL671862.1-201ENST00000515851 349 ntBASIC4.19□□□□□ -1.74
COL8A2P25067 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.19□□□□□ -1.74
COL8A2P25067 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.19□□□□□ -1.74
COL8A2P25067 BGLT3-201ENST00000564523 994 ntBASIC4.19□□□□□ -1.74
COL8A2P25067 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.19□□□□□ -1.74
COL8A2P25067 MTCYBP13-201ENST00000578634 1093 ntBASIC4.19□□□□□ -1.74
COL8A2P25067 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.19□□□□□ -1.74
COL8A2P25067 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.19□□□□□ -1.74
COL8A2P25067 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.19□□□□□ -1.74
COL8A2P25067 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.19□□□□□ -1.74
COL8A2P25067 AC073869.7-201ENST00000640874 297 ntBASIC4.19□□□□□ -1.74
COL8A2P25067 AC099654.2-201ENST00000433031 1980 ntBASIC4.19□□□□□ -1.74
COL8A2P25067 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
COL8A2P25067 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
COL8A2P25067 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
COL8A2P25067 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL8A2P25067 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.19□□□□□ -1.74
COL8A2P25067 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
COL8A2P25067 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
COL8A2P25067 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL8A2P25067 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
COL8A2P25067 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
COL8A2P25067 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
COL8A2P25067 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.19□□□□□ -1.74
COL8A2P25067 SAMMSON-226ENST00000642089 1582 ntBASIC4.19□□□□□ -1.74
COL8A2P25067 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL8A2P25067 AC063976.2-201ENST00000425667 3556 ntBASIC4.18□□□□□ -1.74
COL8A2P25067 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.18□□□□□ -1.74
COL8A2P25067 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL8A2P25067 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL8A2P25067 NR1H5P-201ENST00000452683 1377 ntBASIC4.18□□□□□ -1.74
COL8A2P25067 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
COL8A2P25067 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.18□□□□□ -1.74
COL8A2P25067 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.18□□□□□ -1.74
COL8A2P25067 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL8A2P25067 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
COL8A2P25067 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
COL8A2P25067 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.18□□□□□ -1.74
COL8A2P25067 RN7SKP115-201ENST00000363177 317 ntBASIC4.18□□□□□ -1.74
COL8A2P25067 HMGB3P7-201ENST00000400214 611 ntBASIC4.18□□□□□ -1.74
COL8A2P25067 AL136116.2-201ENST00000404020 785 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms