Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.5□□□□□ -1.69
UBCP0CG48 AL390119.1-201ENST00000440329 312 ntBASIC4.5□□□□□ -1.69
UBCP0CG48 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
UBCP0CG48 AC084754.1-201ENST00000463466 464 ntBASIC4.5□□□□□ -1.69
UBCP0CG48 AC112206.1-201ENST00000468416 477 ntBASIC4.5□□□□□ -1.69
UBCP0CG48 AL133372.1-201ENST00000493565 745 ntBASIC4.5□□□□□ -1.69
UBCP0CG48 AC073073.1-201ENST00000493920 463 ntBASIC4.5□□□□□ -1.69
UBCP0CG48 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.5□□□□□ -1.69
UBCP0CG48 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.5□□□□□ -1.69
UBCP0CG48 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.5□□□□□ -1.69
UBCP0CG48 SNORD116-30-201ENST00000516468 85 ntBASIC4.5□□□□□ -1.69
UBCP0CG48 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.5□□□□□ -1.69
UBCP0CG48 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.5□□□□□ -1.69
UBCP0CG48 HNRNPRP2-201ENST00000528421 743 ntBASIC4.5□□□□□ -1.69
UBCP0CG48 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
UBCP0CG48 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
UBCP0CG48 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.5□□□□□ -1.69
UBCP0CG48 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.5□□□□□ -1.69
UBCP0CG48 AGGF1P9-201ENST00000561884 913 ntBASIC4.5□□□□□ -1.69
UBCP0CG48 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.5□□□□□ -1.69
UBCP0CG48 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.5□□□□□ -1.69
UBCP0CG48 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
UBCP0CG48 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.5□□□□□ -1.69
UBCP0CG48 MIR8080-201ENST00000622224 89 ntBASIC4.5□□□□□ -1.69
UBCP0CG48 AC021106.3-201ENST00000623925 531 ntBASIC4.5□□□□□ -1.69
UBCP0CG48 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.5□□□□□ -1.69
UBCP0CG48 AL596275.2-204ENST00000641628 552 ntBASIC4.5□□□□□ -1.69
UBCP0CG48 AL596275.2-206ENST00000641957 626 ntBASIC4.5□□□□□ -1.69
UBCP0CG48 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
UBCP0CG48 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
UBCP0CG48 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
UBCP0CG48 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
UBCP0CG48 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.5□□□□□ -1.69
UBCP0CG48 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
UBCP0CG48 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.5□□□□□ -1.69
UBCP0CG48 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
UBCP0CG48 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
UBCP0CG48 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.49□□□□□ -1.69
UBCP0CG48 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
UBCP0CG48 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.49□□□□□ -1.69
UBCP0CG48 AC104118.1-201ENST00000607625 1589 ntBASIC4.49□□□□□ -1.69
UBCP0CG48 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
UBCP0CG48 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
UBCP0CG48 OR10AB1P-202ENST00000641219 1686 ntBASIC4.49□□□□□ -1.69
UBCP0CG48 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.49□□□□□ -1.69
UBCP0CG48 RNA5SP510-201ENST00000364697 99 ntBASIC4.49□□□□□ -1.69
UBCP0CG48 RNU4-7P-201ENST00000364758 141 ntBASIC4.49□□□□□ -1.69
UBCP0CG48 RNU1-149P-201ENST00000390870 161 ntBASIC4.49□□□□□ -1.69
UBCP0CG48 U3.32-201ENST00000408116 212 ntBASIC4.49□□□□□ -1.69
UBCP0CG48 GABARAPL3-201ENST00000412799 354 ntBASIC4.49□□□□□ -1.69
UBCP0CG48 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
UBCP0CG48 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.49□□□□□ -1.69
UBCP0CG48 AL139148.1-201ENST00000427122 680 ntBASIC4.49□□□□□ -1.69
UBCP0CG48 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC4.49□□□□□ -1.69
UBCP0CG48 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.49□□□□□ -1.69
UBCP0CG48 RPL23AP19-201ENST00000436229 369 ntBASIC4.49□□□□□ -1.69
UBCP0CG48 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.49□□□□□ -1.69
UBCP0CG48 MTCO3P17-201ENST00000443775 513 ntBASIC4.49□□□□□ -1.69
UBCP0CG48 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.49□□□□□ -1.69
UBCP0CG48 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
UBCP0CG48 BTF3P6-201ENST00000448054 499 ntBASIC4.49□□□□□ -1.69
UBCP0CG48 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.49□□□□□ -1.69
UBCP0CG48 RPL10P17-201ENST00000453852 316 ntBASIC4.49□□□□□ -1.69
UBCP0CG48 RANP1-206ENST00000455094 651 ntBASIC4.49□□□□□ -1.69
UBCP0CG48 CYCSP34-201ENST00000458172 304 ntBASIC4.49□□□□□ -1.69
UBCP0CG48 RN7SL809P-201ENST00000482040 297 ntBASIC4.49□□□□□ -1.69
UBCP0CG48 RN7SL441P-201ENST00000492388 296 ntBASIC4.49□□□□□ -1.69
UBCP0CG48 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.49□□□□□ -1.69
UBCP0CG48 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
UBCP0CG48 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.49□□□□□ -1.69
UBCP0CG48 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.49□□□□□ -1.69
UBCP0CG48 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4.49□□□□□ -1.69
UBCP0CG48 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.49□□□□□ -1.69
UBCP0CG48 AC109635.6-201ENST00000525487 1113 ntBASIC4.49□□□□□ -1.69
UBCP0CG48 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.49□□□□□ -1.69
UBCP0CG48 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.49□□□□□ -1.69
UBCP0CG48 NDUFB4P11-201ENST00000560510 395 ntBASIC4.49□□□□□ -1.69
UBCP0CG48 RPL10P14-201ENST00000565265 298 ntBASIC4.49□□□□□ -1.69
UBCP0CG48 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.49□□□□□ -1.69
UBCP0CG48 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.49□□□□□ -1.69
UBCP0CG48 OR7M1P-201ENST00000608946 533 ntBASIC4.49□□□□□ -1.69
UBCP0CG48 MIR8069-1-201ENST00000616627 86 ntBASIC4.49□□□□□ -1.69
UBCP0CG48 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.49□□□□□ -1.69
UBCP0CG48 MIR8069-2-201ENST00000621412 86 ntBASIC4.49□□□□□ -1.69
UBCP0CG48 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
UBCP0CG48 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
UBCP0CG48 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
UBCP0CG48 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
UBCP0CG48 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
UBCP0CG48 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
UBCP0CG48 AC123912.3-201ENST00000600907 1367 ntBASIC4.49□□□□□ -1.69
UBCP0CG48 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.49□□□□□ -1.69
UBCP0CG48 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
UBCP0CG48 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
UBCP0CG48 AP001273.1-201ENST00000624493 3152 ntBASIC4.49□□□□□ -1.69
UBCP0CG48 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
UBCP0CG48 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
UBCP0CG48 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.48□□□□□ -1.69
UBCP0CG48 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.48□□□□□ -1.69
UBCP0CG48 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms