Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC5.67□□□□□ -1.5
HMGB1P1B2RPK0 SLC8A1-AS1-207ENST00000444629 935 ntTSL 3 BASIC5.67□□□□□ -1.5
HMGB1P1B2RPK0 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMGB1P1B2RPK0 AC073909.1-201ENST00000447112 999 ntBASIC5.67□□□□□ -1.5
HMGB1P1B2RPK0 RPS7P10-201ENST00000464254 603 ntBASIC5.67□□□□□ -1.5
HMGB1P1B2RPK0 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.67□□□□□ -1.5
HMGB1P1B2RPK0 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.67□□□□□ -1.5
HMGB1P1B2RPK0 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.67□□□□□ -1.5
HMGB1P1B2RPK0 IGHVII-49-1-201ENST00000521760 224 ntBASIC5.67□□□□□ -1.5
HMGB1P1B2RPK0 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.67□□□□□ -1.5
HMGB1P1B2RPK0 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.67□□□□□ -1.5
HMGB1P1B2RPK0 AC089984.3-201ENST00000552838 363 ntBASIC5.67□□□□□ -1.5
HMGB1P1B2RPK0 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.67□□□□□ -1.5
HMGB1P1B2RPK0 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.67□□□□□ -1.5
HMGB1P1B2RPK0 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HMGB1P1B2RPK0 AL356801.1-201ENST00000559320 294 ntBASIC5.67□□□□□ -1.5
HMGB1P1B2RPK0 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
HMGB1P1B2RPK0 MIR3157-201ENST00000578688 85 ntBASIC5.67□□□□□ -1.5
HMGB1P1B2RPK0 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HMGB1P1B2RPK0 KDM5DP1-201ENST00000622542 298 ntBASIC5.67□□□□□ -1.5
HMGB1P1B2RPK0 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HMGB1P1B2RPK0 AC083865.1-201ENST00000636634 831 ntBASIC5.67□□□□□ -1.5
HMGB1P1B2RPK0 AL731532.2-201ENST00000623542 1953 ntBASIC5.67□□□□□ -1.5
HMGB1P1B2RPK0 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HMGB1P1B2RPK0 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.67□□□□□ -1.5
HMGB1P1B2RPK0 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMGB1P1B2RPK0 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMGB1P1B2RPK0 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
HMGB1P1B2RPK0 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
HMGB1P1B2RPK0 YES1P1-201ENST00000418510 1628 ntBASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 MAPK10-320ENST00000641462 6696 ntBASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 AC092634.1-201ENST00000366505 199 ntBASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 MIR124-3-201ENST00000384866 87 ntBASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 LYPLA1P3-201ENST00000402650 695 ntBASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 PCNPP4-201ENST00000414817 517 ntBASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 NIFKP3-201ENST00000417799 865 ntBASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 AL161742.1-201ENST00000418154 584 ntBASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 AC007679.3-201ENST00000434035 414 ntBASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 GAPDHP48-201ENST00000436626 961 ntBASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 RN7SL269P-201ENST00000467795 305 ntBASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 NPM1P17-201ENST00000479221 602 ntBASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 AC090686.1-201ENST00000481577 749 ntBASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 AC099521.1-201ENST00000482557 334 ntBASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 IGBP1P4-201ENST00000503202 879 ntBASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 AC010374.1-201ENST00000503762 1237 ntBASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 PDLIM1P4-201ENST00000504327 1006 ntBASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 AC008868.1-201ENST00000509786 737 ntBASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 AC008562.1-201ENST00000521763 330 ntBASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 AP006245.2-201ENST00000522004 300 ntBASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 C1DP5-201ENST00000525775 383 ntBASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 TRIM51DP-201ENST00000529746 596 ntBASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 AC084851.2-201ENST00000530377 364 ntBASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 AC006349.1-201ENST00000555526 235 ntBASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 NTAN1P1-201ENST00000603150 646 ntBASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 AC005034.4-201ENST00000603612 899 ntBASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 AC010680.4-201ENST00000605334 543 ntBASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 AC112198.2-201ENST00000426589 6996 ntBASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMGB1P1B2RPK0 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 AC000374.1-201ENST00000434698 1745 ntBASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 AC119744.1-201ENST00000454746 1715 ntBASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 AC017079.1-201ENST00000333650 415 ntBASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 WFDC10B-202ENST00000335769 475 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms