Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 RNA5SP326-201ENST00000363209 110 ntBASIC1.97□□□□□ -2.09
MACF1Q9UPN3 AC011998.1-201ENST00000433403 117 ntBASIC1.97□□□□□ -2.09
MACF1Q9UPN3 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 AC016251.2-201ENST00000623393 3089 ntBASIC1.96□□□□□ -2.09
MACF1Q9UPN3 TTC41P-205ENST00000551270 3963 ntBASIC1.96□□□□□ -2.1
MACF1Q9UPN3 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 RNU1-130P-201ENST00000363930 160 ntBASIC1.96□□□□□ -2.1
MACF1Q9UPN3 RNA5SP293-201ENST00000410527 113 ntBASIC1.96□□□□□ -2.1
MACF1Q9UPN3 DNAJC19P8-201ENST00000452887 259 ntBASIC1.96□□□□□ -2.1
MACF1Q9UPN3 AC099522.1-202ENST00000514718 367 ntBASIC1.96□□□□□ -2.1
MACF1Q9UPN3 TUG1_1.1-201ENST00000610654 145 ntBASIC1.96□□□□□ -2.1
MACF1Q9UPN3 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 PIGP-202ENST00000360525 6998 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 IGF1R-201ENST00000268035 11803 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 OPCML-203ENST00000524381 6424 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 GABRA1-202ENST00000393943 4686 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 SCP2-206ENST00000430330 938 ntTSL 2 BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 MRPL50P1-201ENST00000431951 384 ntBASIC1.96□□□□□ -2.1
MACF1Q9UPN3 AC015818.6-201ENST00000584274 634 ntBASIC1.96□□□□□ -2.1
MACF1Q9UPN3 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 MIR7975-201ENST00000619350 68 ntBASIC1.96□□□□□ -2.1
MACF1Q9UPN3 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 NHSL2-207ENST00000633930 13660 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 OR4F13P-202ENST00000560066 2054 ntBASIC1.96□□□□□ -2.1
MACF1Q9UPN3 NFASC-201ENST00000339876 10333 ntAPPRIS ALT1 TSL 5 BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 MIR383-201ENST00000362257 73 ntBASIC1.96□□□□□ -2.1
MACF1Q9UPN3 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 AL121890.1-201ENST00000435457 205 ntBASIC1.96□□□□□ -2.1
MACF1Q9UPN3 AC090424.1-201ENST00000535243 736 ntBASIC1.96□□□□□ -2.1
MACF1Q9UPN3 AC019322.1-201ENST00000571869 389 ntBASIC1.96□□□□□ -2.1
MACF1Q9UPN3 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 AL442639.1-201ENST00000625030 1899 ntBASIC1.96□□□□□ -2.1
MACF1Q9UPN3 AC021242.1-201ENST00000507315 2035 ntBASIC1.96□□□□□ -2.1
MACF1Q9UPN3 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 CHFR-201ENST00000266880 11133 ntTSL 2 BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 LARP1BP1-201ENST00000506036 1359 ntBASIC1.96□□□□□ -2.1
MACF1Q9UPN3 CLASP1-203ENST00000409078 8002 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 RGS17P1-201ENST00000423358 553 ntBASIC1.96□□□□□ -2.1
MACF1Q9UPN3 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 AC079168.1-201ENST00000458741 345 ntBASIC1.96□□□□□ -2.1
MACF1Q9UPN3 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 HSPD1P15-201ENST00000505573 1122 ntBASIC1.96□□□□□ -2.1
MACF1Q9UPN3 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 PACRG-211ENST00000621363 360 ntTSL 5 BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 MIR7843-201ENST00000622274 79 ntBASIC1.96□□□□□ -2.1
MACF1Q9UPN3 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 MTCO1P12-201ENST00000414273 1543 ntBASIC1.96□□□□□ -2.1
MACF1Q9UPN3 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 AC114755.2-201ENST00000413520 361 ntBASIC1.96□□□□□ -2.1
MACF1Q9UPN3 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 TEX41-206ENST00000432608 661 ntTSL 3 BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 AC104651.2-201ENST00000447549 528 ntBASIC1.96□□□□□ -2.1
MACF1Q9UPN3 RPS7P6-201ENST00000485777 579 ntBASIC1.96□□□□□ -2.1
MACF1Q9UPN3 HMGN1P15-201ENST00000513870 295 ntBASIC1.96□□□□□ -2.1
MACF1Q9UPN3 AL031985.2-201ENST00000600955 480 ntBASIC1.96□□□□□ -2.1
MACF1Q9UPN3 CR1-203ENST00000367051 7469 ntTSL 5 BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 CR1-204ENST00000367052 7469 ntTSL 5 BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 CR1-205ENST00000367053 7469 ntTSL 5 BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms