Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 OR51B3P-201ENST00000412287 913 ntBASIC5.82□□□□□ -1.48
DKK3Q9UBP4 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.82□□□□□ -1.48
DKK3Q9UBP4 AC005005.2-201ENST00000420779 380 ntBASIC5.82□□□□□ -1.48
DKK3Q9UBP4 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.82□□□□□ -1.48
DKK3Q9UBP4 AC092648.1-201ENST00000425870 423 ntBASIC5.82□□□□□ -1.48
DKK3Q9UBP4 HMGN2P27-201ENST00000427352 270 ntBASIC5.82□□□□□ -1.48
DKK3Q9UBP4 MTND5P25-201ENST00000430499 799 ntBASIC5.82□□□□□ -1.48
DKK3Q9UBP4 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.82□□□□□ -1.48
DKK3Q9UBP4 AC007563.3-201ENST00000433233 371 ntBASIC5.82□□□□□ -1.48
DKK3Q9UBP4 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.82□□□□□ -1.48
DKK3Q9UBP4 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
DKK3Q9UBP4 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.82□□□□□ -1.48
DKK3Q9UBP4 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC5.82□□□□□ -1.48
DKK3Q9UBP4 SUMO2P3-201ENST00000438311 288 ntBASIC5.82□□□□□ -1.48
DKK3Q9UBP4 AL117351.1-201ENST00000438864 766 ntBASIC5.82□□□□□ -1.48
DKK3Q9UBP4 AC064862.4-201ENST00000442180 334 ntBASIC5.82□□□□□ -1.48
DKK3Q9UBP4 AL591719.1-201ENST00000444669 744 ntBASIC5.82□□□□□ -1.48
DKK3Q9UBP4 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.82□□□□□ -1.48
DKK3Q9UBP4 FRG2FP-204ENST00000453982 852 ntBASIC5.82□□□□□ -1.48
DKK3Q9UBP4 AL122001.1-201ENST00000457027 370 ntBASIC5.82□□□□□ -1.48
DKK3Q9UBP4 RNU6-599P-201ENST00000459383 107 ntBASIC5.82□□□□□ -1.48
DKK3Q9UBP4 RNU6-1193P-201ENST00000459461 107 ntBASIC5.82□□□□□ -1.48
DKK3Q9UBP4 AC104629.2-201ENST00000468627 598 ntBASIC5.82□□□□□ -1.48
DKK3Q9UBP4 AC020779.1-201ENST00000478757 796 ntBASIC5.82□□□□□ -1.48
DKK3Q9UBP4 AC079080.1-201ENST00000479841 822 ntBASIC5.82□□□□□ -1.48
DKK3Q9UBP4 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.82□□□□□ -1.48
DKK3Q9UBP4 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.82□□□□□ -1.48
DKK3Q9UBP4 RN7SL570P-201ENST00000484405 292 ntBASIC5.82□□□□□ -1.48
DKK3Q9UBP4 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.82□□□□□ -1.48
DKK3Q9UBP4 AC009120.1-201ENST00000493458 473 ntBASIC5.82□□□□□ -1.48
DKK3Q9UBP4 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.82□□□□□ -1.48
DKK3Q9UBP4 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.82□□□□□ -1.48
DKK3Q9UBP4 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.82□□□□□ -1.48
DKK3Q9UBP4 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
DKK3Q9UBP4 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
DKK3Q9UBP4 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.82□□□□□ -1.48
DKK3Q9UBP4 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.82□□□□□ -1.48
DKK3Q9UBP4 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.82□□□□□ -1.48
DKK3Q9UBP4 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
DKK3Q9UBP4 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.82□□□□□ -1.48
DKK3Q9UBP4 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.82□□□□□ -1.48
DKK3Q9UBP4 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.82□□□□□ -1.48
DKK3Q9UBP4 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.82□□□□□ -1.48
DKK3Q9UBP4 AL022067.1-201ENST00000602426 454 ntBASIC5.82□□□□□ -1.48
DKK3Q9UBP4 AC013444.2-201ENST00000603317 787 ntBASIC5.82□□□□□ -1.48
DKK3Q9UBP4 AP004372.1-201ENST00000604842 844 ntBASIC5.82□□□□□ -1.48
DKK3Q9UBP4 AL139407.1-201ENST00000613826 1175 ntBASIC5.82□□□□□ -1.48
DKK3Q9UBP4 AC126175.1-201ENST00000617041 758 ntBASIC5.82□□□□□ -1.48
DKK3Q9UBP4 AC006386.1-201ENST00000619436 415 ntBASIC5.82□□□□□ -1.48
DKK3Q9UBP4 AL158062.1-201ENST00000619632 745 ntBASIC5.82□□□□□ -1.48
DKK3Q9UBP4 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.82□□□□□ -1.48
DKK3Q9UBP4 RNU6-368P-201ENST00000620928 107 ntBASIC5.82□□□□□ -1.48
DKK3Q9UBP4 RNU6-538P-201ENST00000622329 107 ntBASIC5.82□□□□□ -1.48
DKK3Q9UBP4 AP002967.1-201ENST00000624203 539 ntBASIC5.82□□□□□ -1.48
DKK3Q9UBP4 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC5.82□□□□□ -1.48
DKK3Q9UBP4 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.82□□□□□ -1.48
DKK3Q9UBP4 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
DKK3Q9UBP4 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
DKK3Q9UBP4 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
DKK3Q9UBP4 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.82□□□□□ -1.48
DKK3Q9UBP4 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.82□□□□□ -1.48
DKK3Q9UBP4 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
DKK3Q9UBP4 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
DKK3Q9UBP4 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.82□□□□□ -1.48
DKK3Q9UBP4 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
DKK3Q9UBP4 AC003985.2-201ENST00000562268 1669 ntBASIC5.82□□□□□ -1.48
DKK3Q9UBP4 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
DKK3Q9UBP4 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
DKK3Q9UBP4 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
DKK3Q9UBP4 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
DKK3Q9UBP4 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
DKK3Q9UBP4 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.81□□□□□ -1.48
DKK3Q9UBP4 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
DKK3Q9UBP4 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
DKK3Q9UBP4 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.81□□□□□ -1.48
DKK3Q9UBP4 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
DKK3Q9UBP4 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.81□□□□□ -1.48
DKK3Q9UBP4 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.81□□□□□ -1.48
DKK3Q9UBP4 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
DKK3Q9UBP4 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
DKK3Q9UBP4 AC087752.1-201ENST00000391360 558 ntBASIC5.81□□□□□ -1.48
DKK3Q9UBP4 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
DKK3Q9UBP4 RPL5P19-201ENST00000404228 893 ntBASIC5.81□□□□□ -1.48
DKK3Q9UBP4 RN7SKP278-201ENST00000410504 342 ntBASIC5.81□□□□□ -1.48
DKK3Q9UBP4 AL357752.1-201ENST00000412817 349 ntBASIC5.81□□□□□ -1.48
DKK3Q9UBP4 OR6C64P-201ENST00000419708 825 ntBASIC5.81□□□□□ -1.48
DKK3Q9UBP4 MTCO2P21-201ENST00000419780 677 ntBASIC5.81□□□□□ -1.48
DKK3Q9UBP4 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.81□□□□□ -1.48
DKK3Q9UBP4 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.81□□□□□ -1.48
DKK3Q9UBP4 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.81□□□□□ -1.48
DKK3Q9UBP4 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.81□□□□□ -1.48
DKK3Q9UBP4 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.81□□□□□ -1.48
DKK3Q9UBP4 BUD31P2-201ENST00000449374 300 ntBASIC5.81□□□□□ -1.48
DKK3Q9UBP4 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.81□□□□□ -1.48
DKK3Q9UBP4 AC004129.2-201ENST00000457229 287 ntBASIC5.81□□□□□ -1.48
DKK3Q9UBP4 RPS23P6-201ENST00000466136 431 ntBASIC5.81□□□□□ -1.48
DKK3Q9UBP4 CYCSP20-201ENST00000473154 315 ntBASIC5.81□□□□□ -1.48
DKK3Q9UBP4 AC008410.1-201ENST00000483777 339 ntBASIC5.81□□□□□ -1.48
DKK3Q9UBP4 RPL5P23-201ENST00000496040 868 ntBASIC5.81□□□□□ -1.48
DKK3Q9UBP4 RN7SL284P-201ENST00000498823 275 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms