Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 RPL7P40-201ENST00000481703 745 ntBASIC5.85□□□□□ -1.47
BLOC1S4Q9NUP1 MTCO1P31-201ENST00000506355 492 ntBASIC5.85□□□□□ -1.47
BLOC1S4Q9NUP1 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.85□□□□□ -1.47
BLOC1S4Q9NUP1 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC5.85□□□□□ -1.47
BLOC1S4Q9NUP1 AC023158.1-201ENST00000561632 1025 ntBASIC5.85□□□□□ -1.47
BLOC1S4Q9NUP1 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.85□□□□□ -1.47
BLOC1S4Q9NUP1 AC005242.1-201ENST00000585658 438 ntBASIC5.85□□□□□ -1.47
BLOC1S4Q9NUP1 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.85□□□□□ -1.47
BLOC1S4Q9NUP1 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.85□□□□□ -1.47
BLOC1S4Q9NUP1 AC074101.1-201ENST00000637861 241 ntBASIC5.85□□□□□ -1.47
BLOC1S4Q9NUP1 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.85□□□□□ -1.47
BLOC1S4Q9NUP1 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
BLOC1S4Q9NUP1 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.85□□□□□ -1.47
BLOC1S4Q9NUP1 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 AC235565.1-201ENST00000456962 1325 ntBASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 RNU1-74P-201ENST00000384108 171 ntBASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 RNU4-31P-201ENST00000384211 141 ntBASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 SNORA67-201ENST00000384423 137 ntBASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 MTATP6P19-201ENST00000413797 659 ntBASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 OR52B5P-201ENST00000435337 951 ntBASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 PPIAP20-201ENST00000449839 135 ntBASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 CABYRP1-201ENST00000465493 1045 ntBASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 RPS26P39-201ENST00000469206 341 ntBASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 COPS8P2-201ENST00000473228 627 ntBASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 CDH12P2-201ENST00000504393 298 ntBASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 RPS4XP20-201ENST00000505751 772 ntBASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 MTND2P31-201ENST00000512602 616 ntBASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 SETP12-201ENST00000514068 805 ntBASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 BX510359.5-201ENST00000515651 304 ntBASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 snoU109.6-201ENST00000516831 118 ntBASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 OR4A46P-201ENST00000527255 933 ntBASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 AC027176.2-201ENST00000559166 746 ntBASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 AC084759.1-201ENST00000561168 290 ntBASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 AC022884.2-201ENST00000578535 580 ntBASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 OR4H6P-202ENST00000603819 340 ntBASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 AP005432.2-201ENST00000608162 586 ntBASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 AP000864.1-201ENST00000609424 650 ntBASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 MIR6768-201ENST00000610734 72 ntBASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 MIR6729-201ENST00000618194 65 ntBASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 MIR6837-201ENST00000620884 64 ntBASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 OR52B5P-202ENST00000641118 1110 ntBASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
BLOC1S4Q9NUP1 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.48
BLOC1S4Q9NUP1 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
BLOC1S4Q9NUP1 AC007996.1-201ENST00000620414 2821 ntBASIC5.84□□□□□ -1.48
BLOC1S4Q9NUP1 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.48
BLOC1S4Q9NUP1 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
BLOC1S4Q9NUP1 AL359715.4-201ENST00000606629 1436 ntBASIC5.83□□□□□ -1.48
BLOC1S4Q9NUP1 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
BLOC1S4Q9NUP1 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
BLOC1S4Q9NUP1 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.83□□□□□ -1.48
BLOC1S4Q9NUP1 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
BLOC1S4Q9NUP1 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
BLOC1S4Q9NUP1 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
BLOC1S4Q9NUP1 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
BLOC1S4Q9NUP1 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
BLOC1S4Q9NUP1 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
BLOC1S4Q9NUP1 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
BLOC1S4Q9NUP1 COX5BP7-201ENST00000414780 274 ntBASIC5.83□□□□□ -1.48
BLOC1S4Q9NUP1 OR5M12P-201ENST00000423388 929 ntBASIC5.83□□□□□ -1.48
BLOC1S4Q9NUP1 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.83□□□□□ -1.48
BLOC1S4Q9NUP1 RPS4XP16-201ENST00000427198 791 ntBASIC5.83□□□□□ -1.48
BLOC1S4Q9NUP1 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.83□□□□□ -1.48
BLOC1S4Q9NUP1 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.83□□□□□ -1.48
BLOC1S4Q9NUP1 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.83□□□□□ -1.48
BLOC1S4Q9NUP1 AC245047.2-201ENST00000441060 530 ntBASIC5.83□□□□□ -1.48
BLOC1S4Q9NUP1 RPS11P7-201ENST00000442125 465 ntBASIC5.83□□□□□ -1.48
BLOC1S4Q9NUP1 AC006326.1-201ENST00000445465 787 ntBASIC5.83□□□□□ -1.48
BLOC1S4Q9NUP1 REG1CP-206ENST00000447469 496 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms