Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 AL352984.2-202ENST00000613699 155 ntBASIC6.23□□□□□ -1.41
TLR9Q9NR96 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TLR9Q9NR96 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC6.23□□□□□ -1.41
TLR9Q9NR96 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
TLR9Q9NR96 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.23□□□□□ -1.41
TLR9Q9NR96 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.23□□□□□ -1.41
TLR9Q9NR96 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TLR9Q9NR96 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
TLR9Q9NR96 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.23□□□□□ -1.41
TLR9Q9NR96 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.23□□□□□ -1.41
TLR9Q9NR96 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TLR9Q9NR96 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6.23□□□□□ -1.41
TLR9Q9NR96 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
TLR9Q9NR96 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.23□□□□□ -1.41
TLR9Q9NR96 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.22□□□□□ -1.41
TLR9Q9NR96 LINC02019-201ENST00000608605 2060 ntBASIC6.22□□□□□ -1.41
TLR9Q9NR96 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.22□□□□□ -1.41
TLR9Q9NR96 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TLR9Q9NR96 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
TLR9Q9NR96 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
TLR9Q9NR96 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TLR9Q9NR96 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TLR9Q9NR96 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.22□□□□□ -1.41
TLR9Q9NR96 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TLR9Q9NR96 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TLR9Q9NR96 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
TLR9Q9NR96 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.22□□□□□ -1.41
TLR9Q9NR96 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TLR9Q9NR96 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
TLR9Q9NR96 AC017079.1-201ENST00000333650 415 ntBASIC6.22□□□□□ -1.41
TLR9Q9NR96 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
TLR9Q9NR96 RNA5SP211-201ENST00000365516 117 ntBASIC6.22□□□□□ -1.41
TLR9Q9NR96 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
TLR9Q9NR96 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
TLR9Q9NR96 UBE2V1P11-201ENST00000411559 285 ntBASIC6.22□□□□□ -1.41
TLR9Q9NR96 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TLR9Q9NR96 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC6.22□□□□□ -1.41
TLR9Q9NR96 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.22□□□□□ -1.41
TLR9Q9NR96 AC113412.1-201ENST00000425840 504 ntBASIC6.22□□□□□ -1.41
TLR9Q9NR96 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC6.22□□□□□ -1.41
TLR9Q9NR96 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
TLR9Q9NR96 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.22□□□□□ -1.41
TLR9Q9NR96 SDC4P-201ENST00000453285 601 ntBASIC6.22□□□□□ -1.41
TLR9Q9NR96 FRG2FP-204ENST00000453982 852 ntBASIC6.22□□□□□ -1.41
TLR9Q9NR96 RPL35AP28-201ENST00000459730 331 ntBASIC6.22□□□□□ -1.41
TLR9Q9NR96 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.22□□□□□ -1.41
TLR9Q9NR96 RN7SL547P-201ENST00000490793 290 ntBASIC6.22□□□□□ -1.41
TLR9Q9NR96 RN7SL808P-201ENST00000496066 299 ntBASIC6.22□□□□□ -1.41
TLR9Q9NR96 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC6.22□□□□□ -1.41
TLR9Q9NR96 CCDC11P1-201ENST00000503137 1162 ntBASIC6.22□□□□□ -1.41
TLR9Q9NR96 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TLR9Q9NR96 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TLR9Q9NR96 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC6.22□□□□□ -1.41
TLR9Q9NR96 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC6.22□□□□□ -1.41
TLR9Q9NR96 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC6.22□□□□□ -1.41
TLR9Q9NR96 MRPS16P1-201ENST00000523462 412 ntBASIC6.22□□□□□ -1.41
TLR9Q9NR96 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC6.22□□□□□ -1.41
TLR9Q9NR96 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC6.22□□□□□ -1.41
TLR9Q9NR96 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.22□□□□□ -1.41
TLR9Q9NR96 HAUS8P1-201ENST00000549005 542 ntBASIC6.22□□□□□ -1.41
TLR9Q9NR96 LYZ-203ENST00000549690 669 ntTSL 2 BASIC6.22□□□□□ -1.41
TLR9Q9NR96 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC6.22□□□□□ -1.41
TLR9Q9NR96 AC124856.1-201ENST00000600819 896 ntBASIC6.22□□□□□ -1.41
TLR9Q9NR96 AC024589.2-201ENST00000605642 1294 ntBASIC6.22□□□□□ -1.41
TLR9Q9NR96 AL445222.1-201ENST00000607259 628 ntBASIC6.22□□□□□ -1.41
TLR9Q9NR96 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.22□□□□□ -1.41
TLR9Q9NR96 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.22□□□□□ -1.41
TLR9Q9NR96 PART1_2.1-201ENST00000612397 250 ntBASIC6.22□□□□□ -1.41
TLR9Q9NR96 AC022079.2-201ENST00000619739 566 ntBASIC6.22□□□□□ -1.41
TLR9Q9NR96 AC015722.2-201ENST00000622210 551 ntBASIC6.22□□□□□ -1.41
TLR9Q9NR96 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.22□□□□□ -1.41
TLR9Q9NR96 AL390318.1-201ENST00000624564 687 ntBASIC6.22□□□□□ -1.41
TLR9Q9NR96 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC6.22□□□□□ -1.41
TLR9Q9NR96 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC6.22□□□□□ -1.41
TLR9Q9NR96 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
TLR9Q9NR96 CASC19-264ENST00000641912 1184 ntBASIC6.22□□□□□ -1.41
TLR9Q9NR96 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TLR9Q9NR96 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TLR9Q9NR96 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.22□□□□□ -1.41
TLR9Q9NR96 AC007159.1-201ENST00000566529 4706 ntBASIC6.22□□□□□ -1.41
TLR9Q9NR96 HSPD1P11-201ENST00000508643 1702 ntBASIC6.22□□□□□ -1.41
TLR9Q9NR96 SRRM1P3-201ENST00000426911 2678 ntBASIC6.22□□□□□ -1.41
TLR9Q9NR96 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TLR9Q9NR96 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC6.22□□□□□ -1.41
TLR9Q9NR96 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
TLR9Q9NR96 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
TLR9Q9NR96 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
TLR9Q9NR96 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
TLR9Q9NR96 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
TLR9Q9NR96 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
TLR9Q9NR96 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.21□□□□□ -1.41
TLR9Q9NR96 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.21□□□□□ -1.41
TLR9Q9NR96 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
TLR9Q9NR96 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.21□□□□□ -1.42
TLR9Q9NR96 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
TLR9Q9NR96 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
TLR9Q9NR96 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
TLR9Q9NR96 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
TLR9Q9NR96 RNA5SP507-201ENST00000363603 121 ntBASIC6.21□□□□□ -1.42
TLR9Q9NR96 SNORD56.4-201ENST00000363883 71 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms