Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.51□□□□□ -1.37
SSU72Q9NP77 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SSU72Q9NP77 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SSU72Q9NP77 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SSU72Q9NP77 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SSU72Q9NP77 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SSU72Q9NP77 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
SSU72Q9NP77 MTND5P17-201ENST00000418405 1603 ntBASIC6.5□□□□□ -1.37
SSU72Q9NP77 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
SSU72Q9NP77 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SSU72Q9NP77 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SSU72Q9NP77 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.5□□□□□ -1.37
SSU72Q9NP77 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SSU72Q9NP77 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.5□□□□□ -1.37
SSU72Q9NP77 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SSU72Q9NP77 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
SSU72Q9NP77 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SSU72Q9NP77 SPATA2P1-201ENST00000431223 2055 ntBASIC6.5□□□□□ -1.37
SSU72Q9NP77 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
SSU72Q9NP77 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.5□□□□□ -1.37
SSU72Q9NP77 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
SSU72Q9NP77 AC103591.2-201ENST00000265259 766 ntBASIC6.5□□□□□ -1.37
SSU72Q9NP77 SNORA55-201ENST00000364587 135 ntBASIC6.5□□□□□ -1.37
SSU72Q9NP77 RNU12-2P-201ENST00000364789 156 ntBASIC6.5□□□□□ -1.37
SSU72Q9NP77 U3.14-201ENST00000365363 227 ntBASIC6.5□□□□□ -1.37
SSU72Q9NP77 RNU6-244P-201ENST00000391028 104 ntBASIC6.5□□□□□ -1.37
SSU72Q9NP77 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SSU72Q9NP77 CIR1P3-201ENST00000405137 479 ntBASIC6.5□□□□□ -1.37
SSU72Q9NP77 U3.43-201ENST00000410734 213 ntBASIC6.5□□□□□ -1.37
SSU72Q9NP77 MTCYBP24-201ENST00000420387 1106 ntBASIC6.5□□□□□ -1.37
SSU72Q9NP77 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC6.5□□□□□ -1.37
SSU72Q9NP77 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SSU72Q9NP77 CDC42P6-201ENST00000421246 576 ntBASIC6.5□□□□□ -1.37
SSU72Q9NP77 FDPSP6-201ENST00000425091 512 ntBASIC6.5□□□□□ -1.37
SSU72Q9NP77 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC6.5□□□□□ -1.37
SSU72Q9NP77 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC6.5□□□□□ -1.37
SSU72Q9NP77 AC003989.1-201ENST00000434569 565 ntBASIC6.5□□□□□ -1.37
SSU72Q9NP77 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC6.5□□□□□ -1.37
SSU72Q9NP77 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.5□□□□□ -1.37
SSU72Q9NP77 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SSU72Q9NP77 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC6.5□□□□□ -1.37
SSU72Q9NP77 MTND3P10-201ENST00000450967 341 ntBASIC6.5□□□□□ -1.37
SSU72Q9NP77 AC004692.1-201ENST00000455430 424 ntBASIC6.5□□□□□ -1.37
SSU72Q9NP77 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC6.5□□□□□ -1.37
SSU72Q9NP77 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC6.5□□□□□ -1.37
SSU72Q9NP77 SNORA35.1-201ENST00000458908 128 ntBASIC6.5□□□□□ -1.37
SSU72Q9NP77 AC079193.1-201ENST00000460497 588 ntBASIC6.5□□□□□ -1.37
SSU72Q9NP77 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.5□□□□□ -1.37
SSU72Q9NP77 AC023424.2-201ENST00000493479 777 ntBASIC6.5□□□□□ -1.37
SSU72Q9NP77 AC105252.1-201ENST00000503089 286 ntBASIC6.5□□□□□ -1.37
SSU72Q9NP77 AC091849.1-201ENST00000509920 121 ntBASIC6.5□□□□□ -1.37
SSU72Q9NP77 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.5□□□□□ -1.37
SSU72Q9NP77 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC6.5□□□□□ -1.37
SSU72Q9NP77 RNU6-416P-201ENST00000516265 103 ntBASIC6.5□□□□□ -1.37
SSU72Q9NP77 SNORA20.3-201ENST00000516880 132 ntBASIC6.5□□□□□ -1.37
SSU72Q9NP77 CDC42P3-201ENST00000518493 633 ntBASIC6.5□□□□□ -1.37
SSU72Q9NP77 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC6.5□□□□□ -1.37
SSU72Q9NP77 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.5□□□□□ -1.37
SSU72Q9NP77 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC6.5□□□□□ -1.37
SSU72Q9NP77 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC6.5□□□□□ -1.37
SSU72Q9NP77 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC6.5□□□□□ -1.37
SSU72Q9NP77 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC6.5□□□□□ -1.37
SSU72Q9NP77 AC090651.1-201ENST00000567865 634 ntBASIC6.5□□□□□ -1.37
SSU72Q9NP77 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC6.5□□□□□ -1.37
SSU72Q9NP77 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.5□□□□□ -1.37
SSU72Q9NP77 AL352984.2-201ENST00000611153 546 ntBASIC6.5□□□□□ -1.37
SSU72Q9NP77 AC091304.9-201ENST00000612091 226 ntBASIC6.5□□□□□ -1.37
SSU72Q9NP77 PTCHD3P1-201ENST00000612350 537 ntBASIC6.5□□□□□ -1.37
SSU72Q9NP77 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
SSU72Q9NP77 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SSU72Q9NP77 U6.107-201ENST00000637108 79 ntBASIC6.5□□□□□ -1.37
SSU72Q9NP77 AC243725.1-201ENST00000637164 436 ntBASIC6.5□□□□□ -1.37
SSU72Q9NP77 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SSU72Q9NP77 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SSU72Q9NP77 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
SSU72Q9NP77 CR383658.2-201ENST00000547576 1525 ntBASIC6.5□□□□□ -1.37
SSU72Q9NP77 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
SSU72Q9NP77 AC106872.5-201ENST00000508856 1416 ntBASIC6.5□□□□□ -1.37
SSU72Q9NP77 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SSU72Q9NP77 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SSU72Q9NP77 MAPK6PS3-201ENST00000403865 2162 ntBASIC6.5□□□□□ -1.37
SSU72Q9NP77 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SSU72Q9NP77 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSU72Q9NP77 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC6.49□□□□□ -1.37
SSU72Q9NP77 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSU72Q9NP77 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SSU72Q9NP77 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSU72Q9NP77 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
SSU72Q9NP77 ZNF658B-201ENST00000602828 3408 ntBASIC6.49□□□□□ -1.37
SSU72Q9NP77 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SSU72Q9NP77 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSU72Q9NP77 AL137918.1-201ENST00000624542 1922 ntBASIC6.49□□□□□ -1.37
SSU72Q9NP77 MAPK10-287ENST00000641217 3037 ntBASIC6.49□□□□□ -1.37
SSU72Q9NP77 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SSU72Q9NP77 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SSU72Q9NP77 TMSB4XP4-201ENST00000323496 618 ntBASIC6.49□□□□□ -1.37
SSU72Q9NP77 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSU72Q9NP77 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
SSU72Q9NP77 XGY1-201ENST00000381172 446 ntBASIC6.49□□□□□ -1.37
SSU72Q9NP77 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms