Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
CNTNAP3Q9BZ76 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CNTNAP3Q9BZ76 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CNTNAP3Q9BZ76 COPG1-201ENST00000314797 3078 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CNTNAP3Q9BZ76 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CNTNAP3Q9BZ76 AC009948.5-201ENST00000624360 4406 ntBASIC7.06□□□□□ -1.28
CNTNAP3Q9BZ76 TRIM51EP-201ENST00000524374 1516 ntBASIC7.06□□□□□ -1.28
CNTNAP3Q9BZ76 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CNTNAP3Q9BZ76 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CNTNAP3Q9BZ76 EIF4G3-201ENST00000264211 5802 ntAPPRIS P3 TSL 5 BASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 DIS3L2-202ENST00000325385 3501 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 CD86-201ENST00000264468 2634 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 AC023818.2-201ENST00000623817 2304 ntBASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 PIWIL2-204ENST00000521356 3488 ntTSL 2 BASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 AL590065.1-201ENST00000603371 4774 ntBASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 MRPL22-201ENST00000265229 3035 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 AL139805.2-201ENST00000455305 2433 ntBASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 FANCD2P2-201ENST00000437591 1400 ntBASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 SNORA70.8-201ENST00000384231 136 ntBASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 MTCO2P33-201ENST00000402100 465 ntBASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 RPSAP72-201ENST00000407020 358 ntBASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 RPL21P107-201ENST00000411449 460 ntBASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 Z98752.2-201ENST00000432727 312 ntBASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 AL161454.1-201ENST00000446226 569 ntBASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 AC073594.1-201ENST00000462065 364 ntBASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 MYL6P4-201ENST00000477911 453 ntBASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 RPL7P39-201ENST00000481157 744 ntBASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 GAPDHP39-201ENST00000481866 979 ntBASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 HMGB1P30-201ENST00000492455 606 ntBASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 AL445187.1-201ENST00000502685 260 ntBASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 NPY6R-201ENST00000503807 1112 ntBASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 KLHL2P1-201ENST00000508691 521 ntBASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 AC005741.1-201ENST00000511094 432 ntBASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 AC010493.1-201ENST00000513479 292 ntBASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 AC034159.1-201ENST00000513885 583 ntBASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 LY96-202ENST00000518893 430 ntTSL 3 BASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 RGS5-220ENST00000528689 566 ntTSL 5 BASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 AL845552.1-201ENST00000556820 323 ntBASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 UBE2Q2P11-201ENST00000559691 205 ntBASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 PPIAP14-201ENST00000577627 496 ntBASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 AL022238.3-201ENST00000609279 443 ntBASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 AL512624.1-201ENST00000613638 469 ntBASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 MIR6721-201ENST00000617181 87 ntBASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 AC089999.3-201ENST00000622440 577 ntBASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 AC091905.1-201ENST00000624400 311 ntBASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 AC068213.1-201ENST00000625124 226 ntBASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 MYT1L-AS1-202ENST00000448106 3230 ntTSL 2 BASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC7.05□□□□□ -1.28
CNTNAP3Q9BZ76 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC7.04□□□□□ -1.28
CNTNAP3Q9BZ76 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
CNTNAP3Q9BZ76 ZNF577-201ENST00000301399 3074 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
CNTNAP3Q9BZ76 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC7.04□□□□□ -1.28
CNTNAP3Q9BZ76 AF131215.2-201ENST00000531549 1710 ntBASIC7.04□□□□□ -1.28
CNTNAP3Q9BZ76 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC7.04□□□□□ -1.28
CNTNAP3Q9BZ76 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CNTNAP3Q9BZ76 AC105046.1-201ENST00000566457 4997 ntBASIC7.04□□□□□ -1.28
CNTNAP3Q9BZ76 OR9Q1-201ENST00000335397 2488 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
CNTNAP3Q9BZ76 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
CNTNAP3Q9BZ76 ANKS1B-220ENST00000550693 3372 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CNTNAP3Q9BZ76 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
CNTNAP3Q9BZ76 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
CNTNAP3Q9BZ76 AL136146.1-201ENST00000529830 1667 ntBASIC7.04□□□□□ -1.28
CNTNAP3Q9BZ76 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC7.04□□□□□ -1.28
CNTNAP3Q9BZ76 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms