Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AL354714.5-201ENST00000450131 590 ntBASIC7.82□□□□□ -1.16
PHOX2BQ99453 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC7.82□□□□□ -1.16
PHOX2BQ99453 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC7.82□□□□□ -1.16
PHOX2BQ99453 AC007547.1-201ENST00000462177 490 ntBASIC7.82□□□□□ -1.16
PHOX2BQ99453 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
PHOX2BQ99453 RN7SL170P-201ENST00000487098 295 ntBASIC7.82□□□□□ -1.16
PHOX2BQ99453 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC7.82□□□□□ -1.16
PHOX2BQ99453 AC008817.1-201ENST00000504215 1562 ntBASIC7.82□□□□□ -1.16
PHOX2BQ99453 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
PHOX2BQ99453 RNU6-714P-201ENST00000516963 103 ntBASIC7.82□□□□□ -1.16
PHOX2BQ99453 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC7.82□□□□□ -1.16
PHOX2BQ99453 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC7.82□□□□□ -1.16
PHOX2BQ99453 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC7.82□□□□□ -1.16
PHOX2BQ99453 UBE2CP1-201ENST00000557130 554 ntBASIC7.82□□□□□ -1.16
PHOX2BQ99453 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC7.82□□□□□ -1.16
PHOX2BQ99453 DNM1P31-201ENST00000564149 696 ntBASIC7.82□□□□□ -1.16
PHOX2BQ99453 LINC01974-201ENST00000575126 494 ntTSL 3 BASIC7.82□□□□□ -1.16
PHOX2BQ99453 MIR3137-201ENST00000577367 75 ntBASIC7.82□□□□□ -1.16
PHOX2BQ99453 EIF1-207ENST00000591776 797 ntTSL 4 BASIC7.82□□□□□ -1.16
PHOX2BQ99453 CDC37L1-AS1-201ENST00000607997 463 ntTSL 5 BASIC7.82□□□□□ -1.16
PHOX2BQ99453 AL354950.2-201ENST00000617939 290 ntBASIC7.82□□□□□ -1.16
PHOX2BQ99453 PTPDC1-204ENST00000620992 4437 ntAPPRIS ALT2 TSL 2 BASIC7.82□□□□□ -1.16
PHOX2BQ99453 AC211486.4-201ENST00000621495 113 ntBASIC7.82□□□□□ -1.16
PHOX2BQ99453 SEM1-224ENST00000623693 729 ntTSL 5 BASIC7.82□□□□□ -1.16
PHOX2BQ99453 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC7.82□□□□□ -1.16
PHOX2BQ99453 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
PHOX2BQ99453 TFRC-203ENST00000420415 4814 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
PHOX2BQ99453 CHD7-202ENST00000524602 3456 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
PHOX2BQ99453 LINC00294-201ENST00000631190 3306 ntBASIC7.82□□□□□ -1.16
PHOX2BQ99453 MTTP-208ENST00000511045 3154 ntTSL 2 BASIC7.82□□□□□ -1.16
PHOX2BQ99453 LINC00960-202ENST00000492922 2126 ntTSL 2 BASIC7.82□□□□□ -1.16
PHOX2BQ99453 GEMIN6-201ENST00000281950 3728 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
PHOX2BQ99453 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC7.82□□□□□ -1.16
PHOX2BQ99453 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
PHOX2BQ99453 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
PHOX2BQ99453 SLC9A6-214ENST00000637581 4872 ntTSL 5 BASIC7.82□□□□□ -1.16
PHOX2BQ99453 CEACAMP3-201ENST00000473762 1548 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
PHOX2BQ99453 SLC37A3-202ENST00000340308 2955 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
PHOX2BQ99453 NSD2-224ENST00000514045 3964 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
PHOX2BQ99453 ZNF544-201ENST00000269829 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
PHOX2BQ99453 SORBS1-204ENST00000361941 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
PHOX2BQ99453 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
PHOX2BQ99453 DNAJC5G-202ENST00000402462 1904 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
PHOX2BQ99453 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC7.82□□□□□ -1.16
PHOX2BQ99453 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
PHOX2BQ99453 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
PHOX2BQ99453 FNDC3A-206ENST00000541916 6328 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
PHOX2BQ99453 AC026464.2-201ENST00000567834 2421 ntBASIC7.81□□□□□ -1.16
PHOX2BQ99453 COPS4-201ENST00000264389 1744 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
PHOX2BQ99453 GLYAT-202ENST00000344743 1735 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
PHOX2BQ99453 CD36-221ENST00000534394 1741 ntTSL 2 BASIC7.81□□□□□ -1.16
PHOX2BQ99453 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
PHOX2BQ99453 OR7E25P-202ENST00000641088 5937 ntBASIC7.81□□□□□ -1.16
PHOX2BQ99453 OR2A20P-201ENST00000479887 2913 ntBASIC7.81□□□□□ -1.16
PHOX2BQ99453 CASC19-205ENST00000641013 1411 ntBASIC7.81□□□□□ -1.16
PHOX2BQ99453 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
PHOX2BQ99453 YME1L1-201ENST00000326799 3994 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
PHOX2BQ99453 CHURC1-203ENST00000549115 2629 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
PHOX2BQ99453 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
PHOX2BQ99453 RPL23AP57-201ENST00000332361 466 ntBASIC7.81□□□□□ -1.16
PHOX2BQ99453 RNA5SP79-201ENST00000365193 109 ntBASIC7.81□□□□□ -1.16
PHOX2BQ99453 RNU6-317P-201ENST00000384031 107 ntBASIC7.81□□□□□ -1.16
PHOX2BQ99453 RNU6-1105P-201ENST00000384774 107 ntBASIC7.81□□□□□ -1.16
PHOX2BQ99453 RPL32P23-201ENST00000397237 405 ntBASIC7.81□□□□□ -1.16
PHOX2BQ99453 HYKK-202ENST00000408962 847 ntTSL 5 BASIC7.81□□□□□ -1.16
PHOX2BQ99453 PPIAP30-201ENST00000415473 519 ntBASIC7.81□□□□□ -1.16
PHOX2BQ99453 AC127526.1-201ENST00000417526 366 ntBASIC7.81□□□□□ -1.16
PHOX2BQ99453 RPL7AP51-201ENST00000422016 760 ntBASIC7.81□□□□□ -1.16
PHOX2BQ99453 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
PHOX2BQ99453 DDX3P2-201ENST00000446138 111 ntBASIC7.81□□□□□ -1.16
PHOX2BQ99453 PROX1-AS1-203ENST00000451396 476 ntTSL 5 BASIC7.81□□□□□ -1.16
PHOX2BQ99453 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
PHOX2BQ99453 MEMO1P4-201ENST00000453590 386 ntBASIC7.81□□□□□ -1.16
PHOX2BQ99453 RPL31P11-202ENST00000454082 372 ntBASIC7.81□□□□□ -1.16
PHOX2BQ99453 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
PHOX2BQ99453 AL590490.1-201ENST00000455599 316 ntTSL 5 BASIC7.81□□□□□ -1.16
PHOX2BQ99453 PPP1R2P5-201ENST00000457256 603 ntBASIC7.81□□□□□ -1.16
PHOX2BQ99453 RPL12P40-201ENST00000467028 488 ntBASIC7.81□□□□□ -1.16
PHOX2BQ99453 RPS15AP17-201ENST00000470598 390 ntBASIC7.81□□□□□ -1.16
PHOX2BQ99453 MTCO1P29-201ENST00000496868 288 ntBASIC7.81□□□□□ -1.16
PHOX2BQ99453 RPS26P24-201ENST00000497656 331 ntBASIC7.81□□□□□ -1.16
PHOX2BQ99453 MTND4LP22-201ENST00000508209 276 ntBASIC7.81□□□□□ -1.16
PHOX2BQ99453 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC7.81□□□□□ -1.16
PHOX2BQ99453 AC105417.1-201ENST00000514691 285 ntBASIC7.81□□□□□ -1.16
PHOX2BQ99453 PTPN14-205ENST00000543945 3842 ntTSL 5 BASIC7.81□□□□□ -1.16
PHOX2BQ99453 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC7.81□□□□□ -1.16
PHOX2BQ99453 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
PHOX2BQ99453 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC7.81□□□□□ -1.16
PHOX2BQ99453 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC7.81□□□□□ -1.16
PHOX2BQ99453 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC7.81□□□□□ -1.16
PHOX2BQ99453 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC7.81□□□□□ -1.16
PHOX2BQ99453 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
PHOX2BQ99453 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC7.81□□□□□ -1.16
PHOX2BQ99453 UOX-205ENST00000640983 544 ntTSL 4 BASIC7.81□□□□□ -1.16
PHOX2BQ99453 CAST-236ENST00000511782 2466 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
PHOX2BQ99453 PHF2P2-202ENST00000444553 2865 ntBASIC7.81□□□□□ -1.16
PHOX2BQ99453 WDR95P-201ENST00000425638 1542 ntBASIC7.81□□□□□ -1.16
PHOX2BQ99453 STON2-201ENST00000267540 2977 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
PHOX2BQ99453 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
PHOX2BQ99453 MS4A10-201ENST00000308287 2296 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms