Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC3.77□□□□□ -1.81
AP1S3Q96PC3 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC3.77□□□□□ -1.81
AP1S3Q96PC3 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC3.77□□□□□ -1.81
AP1S3Q96PC3 AL035090.1-201ENST00000454835 332 ntBASIC3.77□□□□□ -1.81
AP1S3Q96PC3 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
AP1S3Q96PC3 AC104849.1-201ENST00000462623 405 ntBASIC3.77□□□□□ -1.81
AP1S3Q96PC3 AC011476.1-201ENST00000466725 307 ntBASIC3.77□□□□□ -1.81
AP1S3Q96PC3 RN7SL51P-201ENST00000468230 285 ntBASIC3.77□□□□□ -1.81
AP1S3Q96PC3 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
AP1S3Q96PC3 AC108751.2-201ENST00000469993 231 ntBASIC3.77□□□□□ -1.81
AP1S3Q96PC3 ALG13-211ENST00000473389 693 ntTSL 2 BASIC3.77□□□□□ -1.81
AP1S3Q96PC3 AC058823.1-201ENST00000485315 474 ntBASIC3.77□□□□□ -1.81
AP1S3Q96PC3 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC3.77□□□□□ -1.81
AP1S3Q96PC3 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC3.77□□□□□ -1.81
AP1S3Q96PC3 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC3.77□□□□□ -1.81
AP1S3Q96PC3 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC3.77□□□□□ -1.81
AP1S3Q96PC3 RNA5SP271-201ENST00000516700 88 ntBASIC3.77□□□□□ -1.81
AP1S3Q96PC3 CYCSP22-201ENST00000517555 339 ntBASIC3.77□□□□□ -1.81
AP1S3Q96PC3 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC3.77□□□□□ -1.81
AP1S3Q96PC3 HMGB1P40-201ENST00000525121 540 ntBASIC3.77□□□□□ -1.81
AP1S3Q96PC3 AGGF1P9-201ENST00000561884 913 ntBASIC3.77□□□□□ -1.81
AP1S3Q96PC3 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
AP1S3Q96PC3 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC3.77□□□□□ -1.81
AP1S3Q96PC3 AL034374.2-201ENST00000605281 548 ntBASIC3.77□□□□□ -1.81
AP1S3Q96PC3 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC3.77□□□□□ -1.81
AP1S3Q96PC3 AC008115.3-201ENST00000614874 549 ntBASIC3.77□□□□□ -1.81
AP1S3Q96PC3 HTR1DP1-201ENST00000616500 888 ntBASIC3.77□□□□□ -1.81
AP1S3Q96PC3 FO681491.1-202ENST00000623392 737 ntBASIC3.77□□□□□ -1.81
AP1S3Q96PC3 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC3.77□□□□□ -1.81
AP1S3Q96PC3 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC3.77□□□□□ -1.81
AP1S3Q96PC3 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
AP1S3Q96PC3 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC3.77□□□□□ -1.81
AP1S3Q96PC3 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.77□□□□□ -1.81
AP1S3Q96PC3 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
AP1S3Q96PC3 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
AP1S3Q96PC3 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
AP1S3Q96PC3 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.77□□□□□ -1.81
AP1S3Q96PC3 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC3.76□□□□□ -1.81
AP1S3Q96PC3 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC3.76□□□□□ -1.81
AP1S3Q96PC3 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC3.76□□□□□ -1.81
AP1S3Q96PC3 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
AP1S3Q96PC3 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC3.76□□□□□ -1.81
AP1S3Q96PC3 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC3.76□□□□□ -1.81
AP1S3Q96PC3 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
AP1S3Q96PC3 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
AP1S3Q96PC3 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
AP1S3Q96PC3 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
AP1S3Q96PC3 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
AP1S3Q96PC3 OR52B3P-201ENST00000314715 928 ntBASIC3.76□□□□□ -1.81
AP1S3Q96PC3 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
AP1S3Q96PC3 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
AP1S3Q96PC3 SEPT7P8-201ENST00000413308 775 ntBASIC3.76□□□□□ -1.81
AP1S3Q96PC3 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC3.76□□□□□ -1.81
AP1S3Q96PC3 GAPDHP49-201ENST00000421421 961 ntBASIC3.76□□□□□ -1.81
AP1S3Q96PC3 EIF4A1P7-201ENST00000421800 1220 ntBASIC3.76□□□□□ -1.81
AP1S3Q96PC3 COX6CP13-201ENST00000428703 226 ntBASIC3.76□□□□□ -1.81
AP1S3Q96PC3 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC3.76□□□□□ -1.81
AP1S3Q96PC3 FMO7P-201ENST00000436045 768 ntBASIC3.76□□□□□ -1.81
AP1S3Q96PC3 GEMIN8P3-201ENST00000445417 720 ntBASIC3.76□□□□□ -1.81
AP1S3Q96PC3 EEF1B2P6-201ENST00000445713 673 ntBASIC3.76□□□□□ -1.81
AP1S3Q96PC3 AC004980.3-201ENST00000447046 365 ntBASIC3.76□□□□□ -1.81
AP1S3Q96PC3 HLA-DPA3-207ENST00000454398 229 ntBASIC3.76□□□□□ -1.81
AP1S3Q96PC3 AC107015.1-201ENST00000466902 747 ntBASIC3.76□□□□□ -1.81
AP1S3Q96PC3 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
AP1S3Q96PC3 UBA52P3-201ENST00000491303 382 ntBASIC3.76□□□□□ -1.81
AP1S3Q96PC3 AC073073.1-201ENST00000493920 463 ntBASIC3.76□□□□□ -1.81
AP1S3Q96PC3 AC097173.1-201ENST00000505862 819 ntBASIC3.76□□□□□ -1.81
AP1S3Q96PC3 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC3.76□□□□□ -1.81
AP1S3Q96PC3 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC3.76□□□□□ -1.81
AP1S3Q96PC3 AC027308.1-201ENST00000517993 110 ntBASIC3.76□□□□□ -1.81
AP1S3Q96PC3 NPM1P6-201ENST00000521088 871 ntBASIC3.76□□□□□ -1.81
AP1S3Q96PC3 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC3.76□□□□□ -1.81
AP1S3Q96PC3 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
AP1S3Q96PC3 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC3.76□□□□□ -1.81
AP1S3Q96PC3 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.76□□□□□ -1.81
AP1S3Q96PC3 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC3.76□□□□□ -1.81
AP1S3Q96PC3 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC3.76□□□□□ -1.81
AP1S3Q96PC3 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC3.76□□□□□ -1.81
AP1S3Q96PC3 AC134669.1-201ENST00000581275 672 ntBASIC3.76□□□□□ -1.81
AP1S3Q96PC3 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC3.76□□□□□ -1.81
AP1S3Q96PC3 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC3.76□□□□□ -1.81
AP1S3Q96PC3 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC3.76□□□□□ -1.81
AP1S3Q96PC3 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
AP1S3Q96PC3 AC025262.3-201ENST00000623666 360 ntBASIC3.76□□□□□ -1.81
AP1S3Q96PC3 AC132068.1-201ENST00000623805 459 ntBASIC3.76□□□□□ -1.81
AP1S3Q96PC3 AL683826.1-201ENST00000624104 627 ntBASIC3.76□□□□□ -1.81
AP1S3Q96PC3 MTCO1P1-201ENST00000624263 1081 ntBASIC3.76□□□□□ -1.81
AP1S3Q96PC3 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC3.76□□□□□ -1.81
AP1S3Q96PC3 AC074101.1-201ENST00000637861 241 ntBASIC3.76□□□□□ -1.81
AP1S3Q96PC3 MIR193BHG-214ENST00000641765 509 ntBASIC3.76□□□□□ -1.81
AP1S3Q96PC3 AC138627.1-204ENST00000641894 765 ntBASIC3.76□□□□□ -1.81
AP1S3Q96PC3 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC3.76□□□□□ -1.81
AP1S3Q96PC3 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC3.76□□□□□ -1.81
AP1S3Q96PC3 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
AP1S3Q96PC3 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
AP1S3Q96PC3 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
AP1S3Q96PC3 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
AP1S3Q96PC3 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 SSXP3-201ENST00000442971 1300 ntBASIC3.75□□□□□ -1.81
AP1S3Q96PC3 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms