Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 FTH1P16-201ENST00000435241 552 ntBASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 AC241584.1-201ENST00000438469 1241 ntBASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 TCEA1P3-201ENST00000443005 880 ntBASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 TSACC-207ENST00000470342 601 ntTSL 2 BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 AC022415.1-202ENST00000486612 523 ntBASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 AC109464.2-201ENST00000510242 943 ntBASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 AC087808.1-201ENST00000520501 361 ntBASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 RPL3P13-201ENST00000550415 216 ntBASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 AP002884.5-201ENST00000595053 1132 ntBASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 AL953862.2-201ENST00000603089 820 ntBASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 AC009237.13-201ENST00000603193 276 ntBASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 AC139493.1-201ENST00000604368 397 ntBASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 AC009237.12-201ENST00000604755 742 ntBASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 AC068276.1-201ENST00000605793 379 ntBASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 MIR7844-201ENST00000616161 122 ntBASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 AC006840.1-201ENST00000623069 542 ntBASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 SNX18P10-201ENST00000625014 519 ntBASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 PABPC1P8-201ENST00000452851 2086 ntBASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 BX284613.1-201ENST00000452221 1641 ntBASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 AC093297.3-201ENST00000607056 2517 ntBASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 AC112243.1-201ENST00000623949 3851 ntBASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 RNA5SP485-201ENST00000365053 119 ntBASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 Y_RNA.311-201ENST00000365068 96 ntBASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 RNU1-84P-201ENST00000365447 164 ntBASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 SUGT1P2-201ENST00000379452 992 ntBASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 RN7SKP129-201ENST00000410288 299 ntBASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 RN7SKP59-201ENST00000410520 314 ntBASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 FNDC3CP-201ENST00000420795 1155 ntBASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 AL034379.1-201ENST00000423216 253 ntBASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 AC010975.2-201ENST00000427781 588 ntBASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 AC073522.1-201ENST00000483312 377 ntBASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 IGLV3-6-201ENST00000523937 250 ntBASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms