Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.17□□□□□ -1.58
VPS33AQ96AX1 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.17□□□□□ -1.58
VPS33AQ96AX1 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC5.17□□□□□ -1.58
VPS33AQ96AX1 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.17□□□□□ -1.58
VPS33AQ96AX1 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.17□□□□□ -1.58
VPS33AQ96AX1 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.17□□□□□ -1.58
VPS33AQ96AX1 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.17□□□□□ -1.58
VPS33AQ96AX1 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.17□□□□□ -1.58
VPS33AQ96AX1 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.17□□□□□ -1.58
VPS33AQ96AX1 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.17□□□□□ -1.58
VPS33AQ96AX1 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.17□□□□□ -1.58
VPS33AQ96AX1 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC5.17□□□□□ -1.58
VPS33AQ96AX1 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.17□□□□□ -1.58
VPS33AQ96AX1 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.17□□□□□ -1.58
VPS33AQ96AX1 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.17□□□□□ -1.58
VPS33AQ96AX1 AC096553.1-201ENST00000605169 829 ntBASIC5.17□□□□□ -1.58
VPS33AQ96AX1 MIR6889-201ENST00000613185 59 ntBASIC5.17□□□□□ -1.58
VPS33AQ96AX1 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.17□□□□□ -1.58
VPS33AQ96AX1 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.17□□□□□ -1.58
VPS33AQ96AX1 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.17□□□□□ -1.58
VPS33AQ96AX1 AL591926.1-201ENST00000620542 217 ntBASIC5.17□□□□□ -1.58
VPS33AQ96AX1 AC073592.7-201ENST00000623659 507 ntBASIC5.17□□□□□ -1.58
VPS33AQ96AX1 AP001052.1-201ENST00000626421 99 ntBASIC5.17□□□□□ -1.58
VPS33AQ96AX1 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.17□□□□□ -1.58
VPS33AQ96AX1 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS33AQ96AX1 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
VPS33AQ96AX1 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.17□□□□□ -1.58
VPS33AQ96AX1 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS33AQ96AX1 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VPS33AQ96AX1 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS33AQ96AX1 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VPS33AQ96AX1 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS33AQ96AX1 AC024341.1-201ENST00000526444 1552 ntBASIC5.16□□□□□ -1.58
VPS33AQ96AX1 AC093311.1-201ENST00000506586 2021 ntBASIC5.16□□□□□ -1.58
VPS33AQ96AX1 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS33AQ96AX1 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VPS33AQ96AX1 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VPS33AQ96AX1 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.16□□□□□ -1.58
VPS33AQ96AX1 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS33AQ96AX1 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.16□□□□□ -1.58
VPS33AQ96AX1 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
VPS33AQ96AX1 CCT8P1-201ENST00000413611 1657 ntBASIC5.16□□□□□ -1.58
VPS33AQ96AX1 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.16□□□□□ -1.58
VPS33AQ96AX1 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.16□□□□□ -1.58
VPS33AQ96AX1 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS33AQ96AX1 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS33AQ96AX1 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VPS33AQ96AX1 AC004386.1-201ENST00000393214 761 ntBASIC5.16□□□□□ -1.58
VPS33AQ96AX1 TAF9BP2-201ENST00000400856 499 ntBASIC5.16□□□□□ -1.58
VPS33AQ96AX1 HMGB1P20-201ENST00000402555 677 ntBASIC5.16□□□□□ -1.58
VPS33AQ96AX1 OR13Z1P-201ENST00000416141 834 ntBASIC5.16□□□□□ -1.58
VPS33AQ96AX1 AC048351.1-201ENST00000420064 602 ntBASIC5.16□□□□□ -1.58
VPS33AQ96AX1 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS33AQ96AX1 AKR1B10P1-201ENST00000425765 942 ntBASIC5.16□□□□□ -1.58
VPS33AQ96AX1 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.16□□□□□ -1.58
VPS33AQ96AX1 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS33AQ96AX1 MTCO1P52-201ENST00000433928 531 ntBASIC5.16□□□□□ -1.58
VPS33AQ96AX1 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS33AQ96AX1 OR6D1P-201ENST00000436165 939 ntBASIC5.16□□□□□ -1.58
VPS33AQ96AX1 AC110602.1-201ENST00000437414 318 ntBASIC5.16□□□□□ -1.58
VPS33AQ96AX1 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.16□□□□□ -1.58
VPS33AQ96AX1 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS33AQ96AX1 TPT1P1-201ENST00000458495 518 ntBASIC5.16□□□□□ -1.58
VPS33AQ96AX1 AC245028.2-201ENST00000458673 253 ntBASIC5.16□□□□□ -1.58
VPS33AQ96AX1 METTL15P1-201ENST00000481421 1045 ntBASIC5.16□□□□□ -1.58
VPS33AQ96AX1 RPL9P15-201ENST00000491096 532 ntBASIC5.16□□□□□ -1.58
VPS33AQ96AX1 RPS12P31-201ENST00000491419 398 ntBASIC5.16□□□□□ -1.58
VPS33AQ96AX1 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VPS33AQ96AX1 AC010627.1-201ENST00000503819 1294 ntBASIC5.16□□□□□ -1.58
VPS33AQ96AX1 AC060775.1-201ENST00000518241 520 ntBASIC5.16□□□□□ -1.58
VPS33AQ96AX1 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS33AQ96AX1 NANOGNBP2-201ENST00000544753 553 ntBASIC5.16□□□□□ -1.58
VPS33AQ96AX1 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS33AQ96AX1 AC040958.1-201ENST00000561102 201 ntBASIC5.16□□□□□ -1.58
VPS33AQ96AX1 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS33AQ96AX1 AL390726.5-202ENST00000564800 256 ntBASIC5.16□□□□□ -1.58
VPS33AQ96AX1 AC092121.1-201ENST00000569452 202 ntBASIC5.16□□□□□ -1.58
VPS33AQ96AX1 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS33AQ96AX1 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS33AQ96AX1 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS33AQ96AX1 SUMO2P14-201ENST00000604488 293 ntBASIC5.16□□□□□ -1.58
VPS33AQ96AX1 AC073137.1-201ENST00000605636 634 ntBASIC5.16□□□□□ -1.58
VPS33AQ96AX1 AC025175.1-201ENST00000606482 759 ntBASIC5.16□□□□□ -1.58
VPS33AQ96AX1 AL365181.4-201ENST00000609800 547 ntBASIC5.16□□□□□ -1.58
VPS33AQ96AX1 AC090617.9-201ENST00000623751 147 ntBASIC5.16□□□□□ -1.58
VPS33AQ96AX1 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.16□□□□□ -1.58
VPS33AQ96AX1 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS33AQ96AX1 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS33AQ96AX1 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
VPS33AQ96AX1 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS33AQ96AX1 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
VPS33AQ96AX1 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
VPS33AQ96AX1 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
VPS33AQ96AX1 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
VPS33AQ96AX1 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
VPS33AQ96AX1 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
VPS33AQ96AX1 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
VPS33AQ96AX1 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
VPS33AQ96AX1 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.15□□□□□ -1.58
VPS33AQ96AX1 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms