Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 RPL7AP28-201ENST00000464513 571 ntBASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 SNRPCP3-201ENST00000474888 476 ntBASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 AC026979.1-201ENST00000492525 396 ntBASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 GAPDHP56-201ENST00000506031 988 ntBASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 SNORA70.11-201ENST00000515987 138 ntBASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 SNORA70.13-201ENST00000516116 138 ntBASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 MIR4277-201ENST00000578298 84 ntBASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 AC127024.5-201ENST00000580085 462 ntBASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SHROOM3Q8TF72 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SHROOM3Q8TF72 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
SHROOM3Q8TF72 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SHROOM3Q8TF72 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.12□□□□□ -1.59
SHROOM3Q8TF72 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
SHROOM3Q8TF72 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.12□□□□□ -1.59
SHROOM3Q8TF72 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHROOM3Q8TF72 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.12□□□□□ -1.59
SHROOM3Q8TF72 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.12□□□□□ -1.59
SHROOM3Q8TF72 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SHROOM3Q8TF72 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHROOM3Q8TF72 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SHROOM3Q8TF72 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SHROOM3Q8TF72 RNA5SP123-201ENST00000363244 119 ntBASIC5.12□□□□□ -1.59
SHROOM3Q8TF72 SNORA51.8-201ENST00000384234 132 ntBASIC5.12□□□□□ -1.59
SHROOM3Q8TF72 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SHROOM3Q8TF72 RPS4XP9-201ENST00000405151 780 ntBASIC5.12□□□□□ -1.59
SHROOM3Q8TF72 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.12□□□□□ -1.59
SHROOM3Q8TF72 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.12□□□□□ -1.59
SHROOM3Q8TF72 RPL23AP56-201ENST00000460778 453 ntBASIC5.12□□□□□ -1.59
SHROOM3Q8TF72 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.12□□□□□ -1.59
SHROOM3Q8TF72 AC012339.2-201ENST00000523996 453 ntBASIC5.12□□□□□ -1.59
SHROOM3Q8TF72 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.12□□□□□ -1.59
SHROOM3Q8TF72 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.12□□□□□ -1.59
SHROOM3Q8TF72 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.12□□□□□ -1.59
SHROOM3Q8TF72 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.12□□□□□ -1.59
SHROOM3Q8TF72 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
SHROOM3Q8TF72 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SHROOM3Q8TF72 AC009643.2-201ENST00000603543 1448 ntBASIC5.12□□□□□ -1.59
SHROOM3Q8TF72 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
SHROOM3Q8TF72 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
SHROOM3Q8TF72 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHROOM3Q8TF72 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SHROOM3Q8TF72 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHROOM3Q8TF72 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SHROOM3Q8TF72 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHROOM3Q8TF72 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.11□□□□□ -1.59
SHROOM3Q8TF72 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHROOM3Q8TF72 AC007996.1-201ENST00000620414 2821 ntBASIC5.11□□□□□ -1.59
SHROOM3Q8TF72 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SHROOM3Q8TF72 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SHROOM3Q8TF72 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.11□□□□□ -1.59
SHROOM3Q8TF72 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.11□□□□□ -1.59
SHROOM3Q8TF72 RN7SL189P-201ENST00000468631 289 ntBASIC5.11□□□□□ -1.59
SHROOM3Q8TF72 SLC25A15P5-201ENST00000508033 253 ntBASIC5.11□□□□□ -1.59
SHROOM3Q8TF72 HMGB1P23-201ENST00000518743 568 ntBASIC5.11□□□□□ -1.59
SHROOM3Q8TF72 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.11□□□□□ -1.59
SHROOM3Q8TF72 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.11□□□□□ -1.59
SHROOM3Q8TF72 AL359219.2-201ENST00000555184 348 ntBASIC5.11□□□□□ -1.59
SHROOM3Q8TF72 CYCSP40-201ENST00000575927 294 ntBASIC5.11□□□□□ -1.59
SHROOM3Q8TF72 AL359757.1-201ENST00000623176 255 ntBASIC5.11□□□□□ -1.59
SHROOM3Q8TF72 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.11□□□□□ -1.59
SHROOM3Q8TF72 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SHROOM3Q8TF72 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.11□□□□□ -1.59
SHROOM3Q8TF72 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHROOM3Q8TF72 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SHROOM3Q8TF72 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
SHROOM3Q8TF72 AL031595.2-201ENST00000624215 19071 ntBASIC5.11□□□□□ -1.59
SHROOM3Q8TF72 RPL32P3-201ENST00000359025 275 ntBASIC5.11□□□□□ -1.59
SHROOM3Q8TF72 CHMP1B2P-201ENST00000399581 597 ntBASIC5.11□□□□□ -1.59
SHROOM3Q8TF72 HMGB3P7-201ENST00000400214 611 ntBASIC5.11□□□□□ -1.59
SHROOM3Q8TF72 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.11□□□□□ -1.59
SHROOM3Q8TF72 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SHROOM3Q8TF72 RGS17P1-201ENST00000423358 553 ntBASIC5.11□□□□□ -1.59
SHROOM3Q8TF72 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.11□□□□□ -1.59
SHROOM3Q8TF72 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.11□□□□□ -1.59
SHROOM3Q8TF72 AC020779.1-201ENST00000478757 796 ntBASIC5.11□□□□□ -1.59
SHROOM3Q8TF72 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.11□□□□□ -1.59
SHROOM3Q8TF72 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
SHROOM3Q8TF72 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.11□□□□□ -1.59
SHROOM3Q8TF72 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.11□□□□□ -1.59
SHROOM3Q8TF72 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.11□□□□□ -1.59
SHROOM3Q8TF72 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.11□□□□□ -1.59
SHROOM3Q8TF72 AL627230.1-201ENST00000613077 211 ntBASIC5.11□□□□□ -1.59
SHROOM3Q8TF72 AL591926.8-201ENST00000616876 211 ntBASIC5.11□□□□□ -1.59
SHROOM3Q8TF72 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHROOM3Q8TF72 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHROOM3Q8TF72 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHROOM3Q8TF72 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SHROOM3Q8TF72 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.1□□□□□ -1.59
SHROOM3Q8TF72 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SHROOM3Q8TF72 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.1□□□□□ -1.59
SHROOM3Q8TF72 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SHROOM3Q8TF72 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SHROOM3Q8TF72 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms