Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
NIPAL3Q6P499 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
NIPAL3Q6P499 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NIPAL3Q6P499 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.75□□□□□ -1.65
NIPAL3Q6P499 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
NIPAL3Q6P499 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NIPAL3Q6P499 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NIPAL3Q6P499 AC132825.1-201ENST00000463573 2247 ntBASIC4.75□□□□□ -1.65
NIPAL3Q6P499 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NIPAL3Q6P499 AC005294.1-201ENST00000355509 281 ntBASIC4.75□□□□□ -1.65
NIPAL3Q6P499 RN7SKP160-201ENST00000363804 340 ntBASIC4.75□□□□□ -1.65
NIPAL3Q6P499 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
NIPAL3Q6P499 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
NIPAL3Q6P499 OR4K12P-201ENST00000406538 961 ntBASIC4.75□□□□□ -1.65
NIPAL3Q6P499 CTSL3P-202ENST00000412179 788 ntBASIC4.75□□□□□ -1.65
NIPAL3Q6P499 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.75□□□□□ -1.65
NIPAL3Q6P499 NPM1P4-201ENST00000414095 812 ntBASIC4.75□□□□□ -1.65
NIPAL3Q6P499 AC244453.4-201ENST00000419150 388 ntBASIC4.75□□□□□ -1.65
NIPAL3Q6P499 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.75□□□□□ -1.65
NIPAL3Q6P499 AC104333.2-201ENST00000422630 192 ntBASIC4.75□□□□□ -1.65
NIPAL3Q6P499 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.75□□□□□ -1.65
NIPAL3Q6P499 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.75□□□□□ -1.65
NIPAL3Q6P499 RPL7L1P9-201ENST00000431298 745 ntBASIC4.75□□□□□ -1.65
NIPAL3Q6P499 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.75□□□□□ -1.65
NIPAL3Q6P499 AP000936.3-201ENST00000438127 255 ntBASIC4.75□□□□□ -1.65
NIPAL3Q6P499 SCAND3P1-201ENST00000439854 1060 ntBASIC4.75□□□□□ -1.65
NIPAL3Q6P499 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.75□□□□□ -1.65
NIPAL3Q6P499 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.75□□□□□ -1.65
NIPAL3Q6P499 AC022431.1-201ENST00000450941 438 ntBASIC4.75□□□□□ -1.65
NIPAL3Q6P499 AC002553.2-201ENST00000453217 340 ntBASIC4.75□□□□□ -1.65
NIPAL3Q6P499 DNAJB5P1-201ENST00000454004 806 ntBASIC4.75□□□□□ -1.65
NIPAL3Q6P499 RPL7P40-201ENST00000481703 745 ntBASIC4.75□□□□□ -1.65
NIPAL3Q6P499 AC058823.1-201ENST00000485315 474 ntBASIC4.75□□□□□ -1.65
NIPAL3Q6P499 RN7SL423P-201ENST00000486202 304 ntBASIC4.75□□□□□ -1.65
NIPAL3Q6P499 AC069304.1-201ENST00000491593 704 ntBASIC4.75□□□□□ -1.65
NIPAL3Q6P499 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.75□□□□□ -1.65
NIPAL3Q6P499 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.75□□□□□ -1.65
NIPAL3Q6P499 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.75□□□□□ -1.65
NIPAL3Q6P499 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.75□□□□□ -1.65
NIPAL3Q6P499 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.75□□□□□ -1.65
NIPAL3Q6P499 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.75□□□□□ -1.65
NIPAL3Q6P499 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.75□□□□□ -1.65
NIPAL3Q6P499 YWHABP2-201ENST00000540201 713 ntBASIC4.75□□□□□ -1.65
NIPAL3Q6P499 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.75□□□□□ -1.65
NIPAL3Q6P499 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.75□□□□□ -1.65
NIPAL3Q6P499 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.75□□□□□ -1.65
NIPAL3Q6P499 AC084373.1-201ENST00000603311 235 ntBASIC4.75□□□□□ -1.65
NIPAL3Q6P499 AC005252.1-201ENST00000604518 1063 ntBASIC4.75□□□□□ -1.65
NIPAL3Q6P499 AL122125.1-201ENST00000616999 600 ntBASIC4.75□□□□□ -1.65
NIPAL3Q6P499 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.75□□□□□ -1.65
NIPAL3Q6P499 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.75□□□□□ -1.65
NIPAL3Q6P499 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.75□□□□□ -1.65
NIPAL3Q6P499 AC073869.10-201ENST00000642016 354 ntBASIC4.75□□□□□ -1.65
NIPAL3Q6P499 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NIPAL3Q6P499 AC006210.2-201ENST00000367074 1545 ntBASIC4.75□□□□□ -1.65
NIPAL3Q6P499 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
NIPAL3Q6P499 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.75□□□□□ -1.65
NIPAL3Q6P499 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NIPAL3Q6P499 AL603750.1-201ENST00000624216 1717 ntBASIC4.75□□□□□ -1.65
NIPAL3Q6P499 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
NIPAL3Q6P499 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NIPAL3Q6P499 AC093591.2-201ENST00000565254 3843 ntBASIC4.74□□□□□ -1.65
NIPAL3Q6P499 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
NIPAL3Q6P499 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
NIPAL3Q6P499 AC017079.1-201ENST00000333650 415 ntBASIC4.74□□□□□ -1.65
NIPAL3Q6P499 RNA5SP223-201ENST00000365174 120 ntBASIC4.74□□□□□ -1.65
NIPAL3Q6P499 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.74□□□□□ -1.65
NIPAL3Q6P499 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.74□□□□□ -1.65
NIPAL3Q6P499 RNU1-149P-201ENST00000390870 161 ntBASIC4.74□□□□□ -1.65
NIPAL3Q6P499 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
NIPAL3Q6P499 AL390774.1-201ENST00000411924 246 ntBASIC4.74□□□□□ -1.65
NIPAL3Q6P499 RPL35AP24-201ENST00000413846 330 ntBASIC4.74□□□□□ -1.65
NIPAL3Q6P499 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.74□□□□□ -1.65
NIPAL3Q6P499 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.74□□□□□ -1.65
NIPAL3Q6P499 MARK2P12-201ENST00000420129 585 ntBASIC4.74□□□□□ -1.65
NIPAL3Q6P499 CFL1P1-202ENST00000432948 411 ntBASIC4.74□□□□□ -1.65
NIPAL3Q6P499 GAPDHP58-201ENST00000438477 1006 ntBASIC4.74□□□□□ -1.65
NIPAL3Q6P499 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.74□□□□□ -1.65
NIPAL3Q6P499 AL035551.1-201ENST00000446931 348 ntBASIC4.74□□□□□ -1.65
NIPAL3Q6P499 NPM1P39-201ENST00000449818 867 ntBASIC4.74□□□□□ -1.65
NIPAL3Q6P499 OR2AO1P-201ENST00000476497 403 ntBASIC4.74□□□□□ -1.65
NIPAL3Q6P499 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.74□□□□□ -1.65
NIPAL3Q6P499 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.74□□□□□ -1.65
NIPAL3Q6P499 ATP5LP3-201ENST00000514223 304 ntBASIC4.74□□□□□ -1.65
NIPAL3Q6P499 AP006245.2-201ENST00000522004 300 ntBASIC4.74□□□□□ -1.65
NIPAL3Q6P499 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.74□□□□□ -1.65
NIPAL3Q6P499 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.74□□□□□ -1.65
NIPAL3Q6P499 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.74□□□□□ -1.65
NIPAL3Q6P499 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.74□□□□□ -1.65
NIPAL3Q6P499 RPL10P14-201ENST00000565265 298 ntBASIC4.74□□□□□ -1.65
NIPAL3Q6P499 RN7SL708P-201ENST00000580952 299 ntBASIC4.74□□□□□ -1.65
NIPAL3Q6P499 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.74□□□□□ -1.65
NIPAL3Q6P499 AC023813.4-201ENST00000607580 580 ntBASIC4.74□□□□□ -1.65
NIPAL3Q6P499 MIR6768-201ENST00000610734 72 ntBASIC4.74□□□□□ -1.65
NIPAL3Q6P499 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.74□□□□□ -1.65
NIPAL3Q6P499 WBP1LP8-201ENST00000617401 327 ntBASIC4.74□□□□□ -1.65
NIPAL3Q6P499 MIR6837-201ENST00000620884 64 ntBASIC4.74□□□□□ -1.65
NIPAL3Q6P499 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.74□□□□□ -1.65
NIPAL3Q6P499 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.74□□□□□ -1.65
NIPAL3Q6P499 AC136428.4-201ENST00000634254 1155 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 145.1 ms