Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.81□□□□□ -1.64
TMEM53Q6P2H8 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC4.81□□□□□ -1.64
TMEM53Q6P2H8 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.81□□□□□ -1.64
TMEM53Q6P2H8 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
TMEM53Q6P2H8 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.81□□□□□ -1.64
TMEM53Q6P2H8 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.81□□□□□ -1.64
TMEM53Q6P2H8 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
TMEM53Q6P2H8 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TMEM53Q6P2H8 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
TMEM53Q6P2H8 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.81□□□□□ -1.64
TMEM53Q6P2H8 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TMEM53Q6P2H8 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TMEM53Q6P2H8 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
TMEM53Q6P2H8 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
TMEM53Q6P2H8 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.8□□□□□ -1.64
TMEM53Q6P2H8 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.8□□□□□ -1.64
TMEM53Q6P2H8 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TMEM53Q6P2H8 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.8□□□□□ -1.64
TMEM53Q6P2H8 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TMEM53Q6P2H8 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
TMEM53Q6P2H8 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TMEM53Q6P2H8 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
TMEM53Q6P2H8 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC4.8□□□□□ -1.64
TMEM53Q6P2H8 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TMEM53Q6P2H8 RNA5SP435-201ENST00000364044 108 ntBASIC4.8□□□□□ -1.64
TMEM53Q6P2H8 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TMEM53Q6P2H8 MIR708-201ENST00000390708 88 ntBASIC4.8□□□□□ -1.64
TMEM53Q6P2H8 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.8□□□□□ -1.64
TMEM53Q6P2H8 RPL5P19-201ENST00000404228 893 ntBASIC4.8□□□□□ -1.64
TMEM53Q6P2H8 RPSAP35-201ENST00000413753 818 ntBASIC4.8□□□□□ -1.64
TMEM53Q6P2H8 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.8□□□□□ -1.64
TMEM53Q6P2H8 EIF4A1P1-201ENST00000420241 934 ntBASIC4.8□□□□□ -1.64
TMEM53Q6P2H8 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
TMEM53Q6P2H8 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.8□□□□□ -1.64
TMEM53Q6P2H8 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.8□□□□□ -1.64
TMEM53Q6P2H8 RPL12P17-201ENST00000432393 498 ntBASIC4.8□□□□□ -1.64
TMEM53Q6P2H8 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.8□□□□□ -1.64
TMEM53Q6P2H8 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.8□□□□□ -1.64
TMEM53Q6P2H8 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TMEM53Q6P2H8 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
TMEM53Q6P2H8 RN7SL717P-201ENST00000478343 297 ntBASIC4.8□□□□□ -1.64
TMEM53Q6P2H8 RN7SL809P-201ENST00000482040 297 ntBASIC4.8□□□□□ -1.64
TMEM53Q6P2H8 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.8□□□□□ -1.64
TMEM53Q6P2H8 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.8□□□□□ -1.64
TMEM53Q6P2H8 MTCYBP19-201ENST00000517463 1124 ntBASIC4.8□□□□□ -1.64
TMEM53Q6P2H8 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.8□□□□□ -1.64
TMEM53Q6P2H8 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.8□□□□□ -1.64
TMEM53Q6P2H8 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.8□□□□□ -1.64
TMEM53Q6P2H8 MIR1273E-201ENST00000581165 102 ntBASIC4.8□□□□□ -1.64
TMEM53Q6P2H8 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.8□□□□□ -1.64
TMEM53Q6P2H8 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
TMEM53Q6P2H8 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TMEM53Q6P2H8 AC104695.2-201ENST00000605056 775 ntBASIC4.8□□□□□ -1.64
TMEM53Q6P2H8 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TMEM53Q6P2H8 RNA5SP440-201ENST00000612665 119 ntBASIC4.8□□□□□ -1.64
TMEM53Q6P2H8 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.8□□□□□ -1.64
TMEM53Q6P2H8 VPS35P1-201ENST00000563400 1518 ntBASIC4.8□□□□□ -1.64
TMEM53Q6P2H8 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
TMEM53Q6P2H8 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TMEM53Q6P2H8 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.8□□□□□ -1.64
TMEM53Q6P2H8 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TMEM53Q6P2H8 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TMEM53Q6P2H8 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.79□□□□□ -1.64
TMEM53Q6P2H8 AC091046.3-201ENST00000631455 1574 ntBASIC4.79□□□□□ -1.64
TMEM53Q6P2H8 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.79□□□□□ -1.64
TMEM53Q6P2H8 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
TMEM53Q6P2H8 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.79□□□□□ -1.64
TMEM53Q6P2H8 AC087190.4-201ENST00000574616 8334 ntBASIC4.79□□□□□ -1.64
TMEM53Q6P2H8 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TMEM53Q6P2H8 RN7SKP124-201ENST00000364730 341 ntBASIC4.79□□□□□ -1.64
TMEM53Q6P2H8 OR1L6-202ENST00000373684 1044 ntBASIC4.79□□□□□ -1.64
TMEM53Q6P2H8 AC007738.1-201ENST00000413892 348 ntBASIC4.79□□□□□ -1.64
TMEM53Q6P2H8 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.79□□□□□ -1.64
TMEM53Q6P2H8 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.79□□□□□ -1.64
TMEM53Q6P2H8 AC019185.1-201ENST00000442718 389 ntBASIC4.79□□□□□ -1.64
TMEM53Q6P2H8 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.79□□□□□ -1.64
TMEM53Q6P2H8 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC4.79□□□□□ -1.64
TMEM53Q6P2H8 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.79□□□□□ -1.64
TMEM53Q6P2H8 RPSAP39-201ENST00000467439 883 ntBASIC4.79□□□□□ -1.64
TMEM53Q6P2H8 RN7SL466P-201ENST00000497546 295 ntBASIC4.79□□□□□ -1.64
TMEM53Q6P2H8 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.79□□□□□ -1.64
TMEM53Q6P2H8 IGLVIV-64-201ENST00000518581 301 ntBASIC4.79□□□□□ -1.64
TMEM53Q6P2H8 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.79□□□□□ -1.64
TMEM53Q6P2H8 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.79□□□□□ -1.64
TMEM53Q6P2H8 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.79□□□□□ -1.64
TMEM53Q6P2H8 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TMEM53Q6P2H8 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
TMEM53Q6P2H8 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TMEM53Q6P2H8 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.79□□□□□ -1.64
TMEM53Q6P2H8 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.79□□□□□ -1.64
TMEM53Q6P2H8 MIR8069-1-201ENST00000616627 86 ntBASIC4.79□□□□□ -1.64
TMEM53Q6P2H8 AL023881.1-201ENST00000621088 301 ntBASIC4.79□□□□□ -1.64
TMEM53Q6P2H8 MIR8069-2-201ENST00000621412 86 ntBASIC4.79□□□□□ -1.64
TMEM53Q6P2H8 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TMEM53Q6P2H8 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TMEM53Q6P2H8 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.79□□□□□ -1.64
TMEM53Q6P2H8 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
TMEM53Q6P2H8 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.79□□□□□ -1.64
TMEM53Q6P2H8 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TMEM53Q6P2H8 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms