Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC96Q2M329 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC96Q2M329 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.2□□□□□ -1.42
CCDC96Q2M329 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.2□□□□□ -1.42
CCDC96Q2M329 AC009237.13-201ENST00000603193 276 ntBASIC6.2□□□□□ -1.42
CCDC96Q2M329 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC96Q2M329 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.2□□□□□ -1.42
CCDC96Q2M329 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC6.2□□□□□ -1.42
CCDC96Q2M329 AL121950.1-201ENST00000624993 2077 ntBASIC6.2□□□□□ -1.42
CCDC96Q2M329 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC6.2□□□□□ -1.42
CCDC96Q2M329 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.2□□□□□ -1.42
CCDC96Q2M329 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
CCDC96Q2M329 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
CCDC96Q2M329 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC96Q2M329 HSPA8P17-201ENST00000427029 1382 ntBASIC6.19□□□□□ -1.42
CCDC96Q2M329 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC96Q2M329 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC96Q2M329 ZNF733P-202ENST00000444809 1573 ntBASIC6.19□□□□□ -1.42
CCDC96Q2M329 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC96Q2M329 AC110792.3-201ENST00000595906 1614 ntBASIC6.19□□□□□ -1.42
CCDC96Q2M329 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
CCDC96Q2M329 AC004817.4-201ENST00000602396 3625 ntBASIC6.19□□□□□ -1.42
CCDC96Q2M329 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC96Q2M329 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC96Q2M329 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC96Q2M329 RNU6-819P-201ENST00000364116 107 ntBASIC6.19□□□□□ -1.42
CCDC96Q2M329 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CCDC96Q2M329 RN7SKP213-201ENST00000410746 298 ntBASIC6.19□□□□□ -1.42
CCDC96Q2M329 RN7SKP247-201ENST00000411094 308 ntBASIC6.19□□□□□ -1.42
CCDC96Q2M329 RN7SKP126-201ENST00000411143 300 ntBASIC6.19□□□□□ -1.42
CCDC96Q2M329 SETP15-201ENST00000412724 337 ntBASIC6.19□□□□□ -1.42
CCDC96Q2M329 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.19□□□□□ -1.42
CCDC96Q2M329 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC96Q2M329 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.19□□□□□ -1.42
CCDC96Q2M329 AC005033.1-201ENST00000428904 813 ntBASIC6.19□□□□□ -1.42
CCDC96Q2M329 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC96Q2M329 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC96Q2M329 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC96Q2M329 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC96Q2M329 AC022431.1-201ENST00000450941 438 ntBASIC6.19□□□□□ -1.42
CCDC96Q2M329 AL389915.2-201ENST00000454576 441 ntBASIC6.19□□□□□ -1.42
CCDC96Q2M329 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC96Q2M329 RN7SL809P-201ENST00000482040 297 ntBASIC6.19□□□□□ -1.42
CCDC96Q2M329 RPL32P9-201ENST00000487963 407 ntBASIC6.19□□□□□ -1.42
CCDC96Q2M329 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC96Q2M329 RN7SL808P-201ENST00000496066 299 ntBASIC6.19□□□□□ -1.42
CCDC96Q2M329 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC96Q2M329 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC96Q2M329 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC96Q2M329 RPS4XP20-201ENST00000505751 772 ntBASIC6.19□□□□□ -1.42
CCDC96Q2M329 SNORA48.9-201ENST00000516419 162 ntBASIC6.19□□□□□ -1.42
CCDC96Q2M329 SCARNA20.4-201ENST00000516969 131 ntBASIC6.19□□□□□ -1.42
CCDC96Q2M329 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC96Q2M329 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.19□□□□□ -1.42
CCDC96Q2M329 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC96Q2M329 AC022832.1-201ENST00000530718 645 ntBASIC6.19□□□□□ -1.42
CCDC96Q2M329 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC96Q2M329 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.19□□□□□ -1.42
CCDC96Q2M329 MIR4443-201ENST00000585052 53 ntBASIC6.19□□□□□ -1.42
CCDC96Q2M329 AC005252.1-201ENST00000604518 1063 ntBASIC6.19□□□□□ -1.42
CCDC96Q2M329 AC244107.2-201ENST00000611773 76 ntBASIC6.19□□□□□ -1.42
CCDC96Q2M329 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC96Q2M329 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC96Q2M329 NXF4-202ENST00000416098 1465 ntBASIC6.19□□□□□ -1.42
CCDC96Q2M329 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC96Q2M329 AC132825.1-201ENST00000463573 2247 ntBASIC6.19□□□□□ -1.42
CCDC96Q2M329 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC96Q2M329 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC96Q2M329 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC96Q2M329 AC104118.1-201ENST00000607625 1589 ntBASIC6.18□□□□□ -1.42
CCDC96Q2M329 AC021242.1-201ENST00000507315 2035 ntBASIC6.18□□□□□ -1.42
CCDC96Q2M329 AC100757.1-201ENST00000616872 1835 ntBASIC6.18□□□□□ -1.42
CCDC96Q2M329 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
CCDC96Q2M329 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CCDC96Q2M329 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC96Q2M329 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC96Q2M329 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
CCDC96Q2M329 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CCDC96Q2M329 SNORA70.6-201ENST00000383934 134 ntBASIC6.18□□□□□ -1.42
CCDC96Q2M329 RNU6-178P-201ENST00000384631 104 ntBASIC6.18□□□□□ -1.42
CCDC96Q2M329 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
CCDC96Q2M329 AL133482.1-201ENST00000415988 498 ntBASIC6.18□□□□□ -1.42
CCDC96Q2M329 OR13Z1P-201ENST00000416141 834 ntBASIC6.18□□□□□ -1.42
CCDC96Q2M329 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC96Q2M329 AC244453.4-201ENST00000419150 388 ntBASIC6.18□□□□□ -1.42
CCDC96Q2M329 RPL23AP4-201ENST00000427757 463 ntBASIC6.18□□□□□ -1.42
CCDC96Q2M329 RPS27AP6-201ENST00000427962 448 ntBASIC6.18□□□□□ -1.42
CCDC96Q2M329 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC96Q2M329 ARL5AP3-201ENST00000439327 386 ntBASIC6.18□□□□□ -1.42
CCDC96Q2M329 RAD1P2-201ENST00000446414 663 ntBASIC6.18□□□□□ -1.42
CCDC96Q2M329 Z92846.1-201ENST00000456203 268 ntBASIC6.18□□□□□ -1.42
CCDC96Q2M329 AP000942.1-201ENST00000463969 747 ntBASIC6.18□□□□□ -1.42
CCDC96Q2M329 AC009127.1-201ENST00000467090 155 ntBASIC6.18□□□□□ -1.42
CCDC96Q2M329 AC093827.1-201ENST00000480094 861 ntBASIC6.18□□□□□ -1.42
CCDC96Q2M329 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC96Q2M329 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6.18□□□□□ -1.42
CCDC96Q2M329 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.18□□□□□ -1.42
CCDC96Q2M329 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC96Q2M329 OR7E10P-201ENST00000526420 991 ntBASIC6.18□□□□□ -1.42
CCDC96Q2M329 BMPR1APS2-201ENST00000527904 1012 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms