Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
PCDH1Q08174 RNU6-1009P-201ENST00000390996 107 ntBASIC6.63□□□□□ -1.35
PCDH1Q08174 RNU1-56P-201ENST00000391303 164 ntBASIC6.63□□□□□ -1.35
PCDH1Q08174 AL512329.1-201ENST00000404600 1592 ntBASIC6.63□□□□□ -1.35
PCDH1Q08174 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
PCDH1Q08174 SNORA11D-201ENST00000408548 128 ntBASIC6.63□□□□□ -1.35
PCDH1Q08174 SNORA11E-201ENST00000408778 128 ntBASIC6.63□□□□□ -1.35
PCDH1Q08174 RN7SKP117-201ENST00000410175 264 ntBASIC6.63□□□□□ -1.35
PCDH1Q08174 RNA5SP280-201ENST00000411230 115 ntBASIC6.63□□□□□ -1.35
PCDH1Q08174 RNA5SP498-201ENST00000411342 120 ntBASIC6.63□□□□□ -1.35
PCDH1Q08174 RPSAP60-201ENST00000415403 880 ntBASIC6.63□□□□□ -1.35
PCDH1Q08174 USP9YP13-201ENST00000417797 480 ntBASIC6.63□□□□□ -1.35
PCDH1Q08174 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC6.63□□□□□ -1.35
PCDH1Q08174 AC007559.1-201ENST00000428736 355 ntBASIC6.63□□□□□ -1.35
PCDH1Q08174 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC6.63□□□□□ -1.35
PCDH1Q08174 CYCSP11-201ENST00000436426 315 ntBASIC6.63□□□□□ -1.35
PCDH1Q08174 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC6.63□□□□□ -1.35
PCDH1Q08174 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC6.63□□□□□ -1.35
PCDH1Q08174 SSXP3-201ENST00000442971 1300 ntBASIC6.63□□□□□ -1.35
PCDH1Q08174 OR7E125P-201ENST00000443450 846 ntBASIC6.63□□□□□ -1.35
PCDH1Q08174 AL033528.1-201ENST00000453780 140 ntBASIC6.63□□□□□ -1.35
PCDH1Q08174 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
PCDH1Q08174 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC6.63□□□□□ -1.35
PCDH1Q08174 AC068522.1-201ENST00000482895 345 ntBASIC6.63□□□□□ -1.35
PCDH1Q08174 RN7SL776P-201ENST00000493390 268 ntBASIC6.63□□□□□ -1.35
PCDH1Q08174 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC6.63□□□□□ -1.35
PCDH1Q08174 AC011352.3-201ENST00000505162 593 ntBASIC6.63□□□□□ -1.35
PCDH1Q08174 NACAP5-201ENST00000509863 636 ntBASIC6.63□□□□□ -1.35
PCDH1Q08174 PTGES3P3-201ENST00000511479 482 ntBASIC6.63□□□□□ -1.35
PCDH1Q08174 RNY4P37-201ENST00000516225 96 ntBASIC6.63□□□□□ -1.35
PCDH1Q08174 PAICSP4-201ENST00000517543 1253 ntBASIC6.63□□□□□ -1.35
PCDH1Q08174 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.63□□□□□ -1.35
PCDH1Q08174 AC087752.2-201ENST00000521219 281 ntBASIC6.63□□□□□ -1.35
PCDH1Q08174 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC6.63□□□□□ -1.35
PCDH1Q08174 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PCDH1Q08174 IGHVIII-25-1-201ENST00000522143 241 ntBASIC6.63□□□□□ -1.35
PCDH1Q08174 OR5AL2P-201ENST00000532185 920 ntBASIC6.63□□□□□ -1.35
PCDH1Q08174 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDH1Q08174 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
PCDH1Q08174 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PCDH1Q08174 AL135978.1-201ENST00000553618 1266 ntBASIC6.63□□□□□ -1.35
PCDH1Q08174 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDH1Q08174 RN7SL689P-201ENST00000577215 297 ntBASIC6.63□□□□□ -1.35
PCDH1Q08174 RN7SL199P-201ENST00000578752 281 ntBASIC6.63□□□□□ -1.35
PCDH1Q08174 RN7SL656P-201ENST00000579044 281 ntBASIC6.63□□□□□ -1.35
PCDH1Q08174 RN7SL404P-201ENST00000582421 281 ntBASIC6.63□□□□□ -1.35
PCDH1Q08174 AC074141.1-201ENST00000588129 2995 ntBASIC6.63□□□□□ -1.35
PCDH1Q08174 AC011447.2-201ENST00000592921 283 ntBASIC6.63□□□□□ -1.35
PCDH1Q08174 AC020914.7-201ENST00000594477 545 ntBASIC6.63□□□□□ -1.35
PCDH1Q08174 AC233280.2-201ENST00000603917 1070 ntBASIC6.63□□□□□ -1.35
PCDH1Q08174 TAS2R6P-201ENST00000605022 826 ntBASIC6.63□□□□□ -1.35
PCDH1Q08174 AC004908.1-201ENST00000606572 541 ntBASIC6.63□□□□□ -1.35
PCDH1Q08174 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.63□□□□□ -1.35
PCDH1Q08174 AC245407.2-201ENST00000614199 451 ntBASIC6.63□□□□□ -1.35
PCDH1Q08174 AC027807.2-201ENST00000616099 408 ntBASIC6.63□□□□□ -1.35
PCDH1Q08174 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.63□□□□□ -1.35
PCDH1Q08174 AL139089.1-201ENST00000620372 975 ntBASIC6.63□□□□□ -1.35
PCDH1Q08174 AC008626.2-201ENST00000624425 248 ntBASIC6.63□□□□□ -1.35
PCDH1Q08174 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC6.63□□□□□ -1.35
PCDH1Q08174 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.63□□□□□ -1.35
PCDH1Q08174 CASC19-280ENST00000642102 1351 ntBASIC6.63□□□□□ -1.35
PCDH1Q08174 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDH1Q08174 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PCDH1Q08174 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDH1Q08174 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PCDH1Q08174 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PCDH1Q08174 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.63□□□□□ -1.35
PCDH1Q08174 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
PCDH1Q08174 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
PCDH1Q08174 AC006600.2-201ENST00000624834 2506 ntBASIC6.62□□□□□ -1.35
PCDH1Q08174 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
PCDH1Q08174 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
PCDH1Q08174 AP002800.1-201ENST00000624982 2225 ntBASIC6.62□□□□□ -1.35
PCDH1Q08174 PABPC1P8-201ENST00000452851 2086 ntBASIC6.62□□□□□ -1.35
PCDH1Q08174 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.62□□□□□ -1.35
PCDH1Q08174 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.62□□□□□ -1.35
PCDH1Q08174 CCT8P1-201ENST00000413611 1657 ntBASIC6.62□□□□□ -1.35
PCDH1Q08174 AC012078.1-201ENST00000405035 1646 ntBASIC6.62□□□□□ -1.35
PCDH1Q08174 AC007406.5-201ENST00000570140 3170 ntBASIC6.62□□□□□ -1.35
PCDH1Q08174 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PCDH1Q08174 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
PCDH1Q08174 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
PCDH1Q08174 ZNF680P1-201ENST00000436625 1469 ntBASIC6.62□□□□□ -1.35
PCDH1Q08174 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PCDH1Q08174 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.62□□□□□ -1.35
PCDH1Q08174 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PCDH1Q08174 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.62□□□□□ -1.35
PCDH1Q08174 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PCDH1Q08174 RNY4P14-201ENST00000363656 96 ntBASIC6.62□□□□□ -1.35
PCDH1Q08174 RN7SKP257-201ENST00000364525 309 ntBASIC6.62□□□□□ -1.35
PCDH1Q08174 SNORA70.3-201ENST00000365075 132 ntBASIC6.62□□□□□ -1.35
PCDH1Q08174 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC6.62□□□□□ -1.35
PCDH1Q08174 RNU6-532P-201ENST00000384318 107 ntBASIC6.62□□□□□ -1.35
PCDH1Q08174 EI24P3-201ENST00000399046 1062 ntBASIC6.62□□□□□ -1.35
PCDH1Q08174 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.62□□□□□ -1.35
PCDH1Q08174 OR51A3P-201ENST00000413596 924 ntBASIC6.62□□□□□ -1.35
PCDH1Q08174 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC6.62□□□□□ -1.35
PCDH1Q08174 AC114814.2-201ENST00000419195 485 ntBASIC6.62□□□□□ -1.35
PCDH1Q08174 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.62□□□□□ -1.35
PCDH1Q08174 AL359633.1-201ENST00000421403 310 ntBASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms