Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SCN1BQ07699 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SCN1BQ07699 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SCN1BQ07699 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
SCN1BQ07699 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SCN1BQ07699 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SCN1BQ07699 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SCN1BQ07699 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
SCN1BQ07699 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SCN1BQ07699 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.87□□□□□ -1.63
SCN1BQ07699 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
SCN1BQ07699 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
SCN1BQ07699 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SCN1BQ07699 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.87□□□□□ -1.63
SCN1BQ07699 ODF3-202ENST00000342593 386 ntTSL 5 BASIC4.87□□□□□ -1.63
SCN1BQ07699 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SCN1BQ07699 MIR142-201ENST00000384835 87 ntBASIC4.87□□□□□ -1.63
SCN1BQ07699 RN7SKP29-201ENST00000410957 272 ntBASIC4.87□□□□□ -1.63
SCN1BQ07699 RPL12P9-201ENST00000412942 488 ntBASIC4.87□□□□□ -1.63
SCN1BQ07699 EEF1A1P29-201ENST00000416082 1096 ntBASIC4.87□□□□□ -1.63
SCN1BQ07699 OR6C64P-201ENST00000419708 825 ntBASIC4.87□□□□□ -1.63
SCN1BQ07699 AC104333.2-201ENST00000422630 192 ntBASIC4.87□□□□□ -1.63
SCN1BQ07699 MTND6P12-201ENST00000428247 522 ntBASIC4.87□□□□□ -1.63
SCN1BQ07699 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.87□□□□□ -1.63
SCN1BQ07699 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.87□□□□□ -1.63
SCN1BQ07699 AL590762.3-201ENST00000436372 640 ntBASIC4.87□□□□□ -1.63
SCN1BQ07699 AL031663.1-201ENST00000437445 219 ntBASIC4.87□□□□□ -1.63
SCN1BQ07699 MTND6P18-201ENST00000439477 513 ntBASIC4.87□□□□□ -1.63
SCN1BQ07699 GEMIN8P3-201ENST00000445417 720 ntBASIC4.87□□□□□ -1.63
SCN1BQ07699 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.87□□□□□ -1.63
SCN1BQ07699 AL353718.1-201ENST00000451028 517 ntBASIC4.87□□□□□ -1.63
SCN1BQ07699 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SCN1BQ07699 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.87□□□□□ -1.63
SCN1BQ07699 RPS23P2-201ENST00000463671 415 ntBASIC4.87□□□□□ -1.63
SCN1BQ07699 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.87□□□□□ -1.63
SCN1BQ07699 AC122718.2-201ENST00000505325 591 ntBASIC4.87□□□□□ -1.63
SCN1BQ07699 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC4.87□□□□□ -1.63
SCN1BQ07699 RNA5SP340-201ENST00000517132 107 ntBASIC4.87□□□□□ -1.63
SCN1BQ07699 IGKV3D-25-201ENST00000519599 235 ntBASIC4.87□□□□□ -1.63
SCN1BQ07699 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.87□□□□□ -1.63
SCN1BQ07699 CETN3-206ENST00000522864 738 ntTSL 3 BASIC4.87□□□□□ -1.63
SCN1BQ07699 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SCN1BQ07699 PCNAP4-201ENST00000532690 730 ntBASIC4.87□□□□□ -1.63
SCN1BQ07699 AC134349.2-201ENST00000535136 910 ntBASIC4.87□□□□□ -1.63
SCN1BQ07699 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
SCN1BQ07699 BNIP3P1-201ENST00000547295 580 ntBASIC4.87□□□□□ -1.63
SCN1BQ07699 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.87□□□□□ -1.63
SCN1BQ07699 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.87□□□□□ -1.63
SCN1BQ07699 AC006530.1-201ENST00000555980 571 ntBASIC4.87□□□□□ -1.63
SCN1BQ07699 SETP1-201ENST00000556014 845 ntBASIC4.87□□□□□ -1.63
SCN1BQ07699 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.87□□□□□ -1.63
SCN1BQ07699 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.87□□□□□ -1.63
SCN1BQ07699 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC4.87□□□□□ -1.63
SCN1BQ07699 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.87□□□□□ -1.63
SCN1BQ07699 AC233702.9-201ENST00000581528 203 ntBASIC4.87□□□□□ -1.63
SCN1BQ07699 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC4.87□□□□□ -1.63
SCN1BQ07699 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC4.87□□□□□ -1.63
SCN1BQ07699 AC090236.2-201ENST00000587933 1101 ntBASIC4.87□□□□□ -1.63
SCN1BQ07699 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
SCN1BQ07699 TEX41-218ENST00000596540 882 ntTSL 5 BASIC4.87□□□□□ -1.63
SCN1BQ07699 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.87□□□□□ -1.63
SCN1BQ07699 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.87□□□□□ -1.63
SCN1BQ07699 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.87□□□□□ -1.63
SCN1BQ07699 MIR6806-201ENST00000622141 64 ntBASIC4.87□□□□□ -1.63
SCN1BQ07699 AC073592.6-201ENST00000624271 415 ntBASIC4.87□□□□□ -1.63
SCN1BQ07699 AC024023.1-201ENST00000624530 922 ntBASIC4.87□□□□□ -1.63
SCN1BQ07699 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SCN1BQ07699 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SCN1BQ07699 BTBD10P1-201ENST00000549824 1352 ntBASIC4.87□□□□□ -1.63
SCN1BQ07699 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SCN1BQ07699 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.87□□□□□ -1.63
SCN1BQ07699 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
SCN1BQ07699 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
SCN1BQ07699 MRE11P1-201ENST00000464884 2127 ntBASIC4.87□□□□□ -1.63
SCN1BQ07699 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC4.87□□□□□ -1.63
SCN1BQ07699 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SCN1BQ07699 AL022393.1-201ENST00000625142 1677 ntBASIC4.86□□□□□ -1.63
SCN1BQ07699 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.86□□□□□ -1.63
SCN1BQ07699 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.86□□□□□ -1.63
SCN1BQ07699 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.86□□□□□ -1.63
SCN1BQ07699 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.86□□□□□ -1.63
SCN1BQ07699 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
SCN1BQ07699 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
SCN1BQ07699 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
SCN1BQ07699 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SCN1BQ07699 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SCN1BQ07699 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
SCN1BQ07699 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SCN1BQ07699 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
SCN1BQ07699 PPIAP9-201ENST00000403866 498 ntBASIC4.86□□□□□ -1.63
SCN1BQ07699 AL359643.1-201ENST00000404109 423 ntBASIC4.86□□□□□ -1.63
SCN1BQ07699 HMGB1P13-201ENST00000406019 642 ntBASIC4.86□□□□□ -1.63
SCN1BQ07699 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SCN1BQ07699 AL354890.1-201ENST00000413730 346 ntBASIC4.86□□□□□ -1.63
SCN1BQ07699 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC4.86□□□□□ -1.63
SCN1BQ07699 LINC01347-201ENST00000417964 355 ntBASIC4.86□□□□□ -1.63
SCN1BQ07699 SEC63P1-201ENST00000425785 1258 ntBASIC4.86□□□□□ -1.63
SCN1BQ07699 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.86□□□□□ -1.63
SCN1BQ07699 NPM1P22-201ENST00000427761 952 ntBASIC4.86□□□□□ -1.63
SCN1BQ07699 AC023141.6-201ENST00000429418 337 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms