Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.2□□□□□ -1.58
CDH4P55283 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.2□□□□□ -1.58
CDH4P55283 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDH4P55283 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.2□□□□□ -1.58
CDH4P55283 AC245100.2-201ENST00000454544 1679 ntBASIC5.2□□□□□ -1.58
CDH4P55283 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CDH4P55283 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
CDH4P55283 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CDH4P55283 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.2□□□□□ -1.58
CDH4P55283 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDH4P55283 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDH4P55283 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CDH4P55283 AC007996.1-201ENST00000620414 2821 ntBASIC5.19□□□□□ -1.58
CDH4P55283 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDH4P55283 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDH4P55283 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDH4P55283 SNORA58B-201ENST00000364259 136 ntBASIC5.19□□□□□ -1.58
CDH4P55283 RNA5SP428-201ENST00000365129 132 ntBASIC5.19□□□□□ -1.58
CDH4P55283 SNORA77-201ENST00000408716 125 ntBASIC5.19□□□□□ -1.58
CDH4P55283 AC007394.1-201ENST00000421941 531 ntBASIC5.19□□□□□ -1.58
CDH4P55283 HMGN2P27-201ENST00000427352 270 ntBASIC5.19□□□□□ -1.58
CDH4P55283 RBMY2QP-201ENST00000429799 1147 ntBASIC5.19□□□□□ -1.58
CDH4P55283 RHOT1P3-201ENST00000436571 331 ntBASIC5.19□□□□□ -1.58
CDH4P55283 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.19□□□□□ -1.58
CDH4P55283 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.19□□□□□ -1.58
CDH4P55283 IGHV5-78-201ENST00000450948 295 ntBASIC5.19□□□□□ -1.58
CDH4P55283 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.19□□□□□ -1.58
CDH4P55283 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.19□□□□□ -1.58
CDH4P55283 AGGF1P3-201ENST00000493675 1213 ntBASIC5.19□□□□□ -1.58
CDH4P55283 RPL37AP8-201ENST00000494116 276 ntBASIC5.19□□□□□ -1.58
CDH4P55283 RNA5SP43-201ENST00000516559 110 ntBASIC5.19□□□□□ -1.58
CDH4P55283 AP000676.2-201ENST00000529711 301 ntBASIC5.19□□□□□ -1.58
CDH4P55283 AC025423.2-201ENST00000537570 439 ntBASIC5.19□□□□□ -1.58
CDH4P55283 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.19□□□□□ -1.58
CDH4P55283 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDH4P55283 AC040958.1-201ENST00000561102 201 ntBASIC5.19□□□□□ -1.58
CDH4P55283 AC027216.1-201ENST00000577726 685 ntBASIC5.19□□□□□ -1.58
CDH4P55283 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.19□□□□□ -1.58
CDH4P55283 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.19□□□□□ -1.58
CDH4P55283 SOCS5P3-201ENST00000425115 1576 ntBASIC5.19□□□□□ -1.58
CDH4P55283 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.19□□□□□ -1.58
CDH4P55283 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.19□□□□□ -1.58
CDH4P55283 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CDH4P55283 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDH4P55283 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.18□□□□□ -1.58
CDH4P55283 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDH4P55283 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDH4P55283 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDH4P55283 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CDH4P55283 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CDH4P55283 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDH4P55283 Z95331.1-201ENST00000623075 23112 ntBASIC5.18□□□□□ -1.58
CDH4P55283 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDH4P55283 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
CDH4P55283 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDH4P55283 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CDH4P55283 RNA5SP187-201ENST00000384400 119 ntBASIC5.18□□□□□ -1.58
CDH4P55283 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CDH4P55283 AL645733.1-201ENST00000402250 217 ntBASIC5.18□□□□□ -1.58
CDH4P55283 RNA5SP296-201ENST00000410523 111 ntBASIC5.18□□□□□ -1.58
CDH4P55283 RNU2-22P-201ENST00000411266 212 ntBASIC5.18□□□□□ -1.58
CDH4P55283 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.18□□□□□ -1.58
CDH4P55283 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.18□□□□□ -1.58
CDH4P55283 PTP4A1P1-201ENST00000420539 515 ntBASIC5.18□□□□□ -1.58
CDH4P55283 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.18□□□□□ -1.58
CDH4P55283 PSMD10P3-201ENST00000437000 448 ntBASIC5.18□□□□□ -1.58
CDH4P55283 RPS29P9-201ENST00000440360 171 ntBASIC5.18□□□□□ -1.58
CDH4P55283 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.18□□□□□ -1.58
CDH4P55283 OR52Y1P-201ENST00000452418 828 ntBASIC5.18□□□□□ -1.58
CDH4P55283 RN7SL610P-201ENST00000463845 291 ntBASIC5.18□□□□□ -1.58
CDH4P55283 AC093270.2-201ENST00000486157 792 ntBASIC5.18□□□□□ -1.58
CDH4P55283 NDUFA5P12-201ENST00000503796 343 ntBASIC5.18□□□□□ -1.58
CDH4P55283 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.18□□□□□ -1.58
CDH4P55283 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.18□□□□□ -1.58
CDH4P55283 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.18□□□□□ -1.58
CDH4P55283 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.18□□□□□ -1.58
CDH4P55283 AL512310.9-201ENST00000553311 948 ntBASIC5.18□□□□□ -1.58
CDH4P55283 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.18□□□□□ -1.58
CDH4P55283 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.18□□□□□ -1.58
CDH4P55283 AP002884.5-201ENST00000595053 1132 ntBASIC5.18□□□□□ -1.58
CDH4P55283 AC090510.2-201ENST00000617465 629 ntBASIC5.18□□□□□ -1.58
CDH4P55283 AC091905.4-201ENST00000623432 202 ntBASIC5.18□□□□□ -1.58
CDH4P55283 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.18□□□□□ -1.58
CDH4P55283 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.18□□□□□ -1.58
CDH4P55283 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CDH4P55283 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDH4P55283 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.18□□□□□ -1.58
CDH4P55283 AC112255.1-201ENST00000624070 2493 ntBASIC5.18□□□□□ -1.58
CDH4P55283 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDH4P55283 AC233968.1-201ENST00000611212 1300 ntBASIC5.18□□□□□ -1.58
CDH4P55283 AC112198.2-201ENST00000426589 6996 ntBASIC5.18□□□□□ -1.58
CDH4P55283 TTC39DP-201ENST00000416781 1688 ntBASIC5.18□□□□□ -1.58
CDH4P55283 AL450345.1-202ENST00000605741 3881 ntBASIC5.18□□□□□ -1.58
CDH4P55283 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.18□□□□□ -1.58
CDH4P55283 TRIM51GP-201ENST00000534741 1350 ntBASIC5.17□□□□□ -1.58
CDH4P55283 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDH4P55283 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.17□□□□□ -1.58
CDH4P55283 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDH4P55283 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.17□□□□□ -1.58
CDH4P55283 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms