Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC113618.1-201ENST00000416747 285 ntBASIC6.96□□□□□ -1.3
RNF144AP50876 MTCO2P27-201ENST00000420740 428 ntBASIC6.96□□□□□ -1.3
RNF144AP50876 RBM6-203ENST00000421682 684 ntTSL 2 BASIC6.96□□□□□ -1.3
RNF144AP50876 AC007394.1-201ENST00000421941 531 ntBASIC6.96□□□□□ -1.3
RNF144AP50876 SNX18P3-201ENST00000424993 835 ntBASIC6.96□□□□□ -1.3
RNF144AP50876 OR51AB1P-201ENST00000429046 620 ntBASIC6.96□□□□□ -1.3
RNF144AP50876 DDX11L10-201ENST00000430178 571 ntBASIC6.96□□□□□ -1.3
RNF144AP50876 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
RNF144AP50876 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.96□□□□□ -1.3
RNF144AP50876 AC099344.1-201ENST00000433548 492 ntBASIC6.96□□□□□ -1.3
RNF144AP50876 AL606489.2-201ENST00000433886 234 ntBASIC6.96□□□□□ -1.3
RNF144AP50876 C5orf24-203ENST00000435259 851 ntAPPRIS P1 TSL 3 BASIC6.96□□□□□ -1.3
RNF144AP50876 AL138787.1-202ENST00000437804 898 ntBASIC6.96□□□□□ -1.3
RNF144AP50876 RPL31P44-201ENST00000447680 377 ntBASIC6.96□□□□□ -1.3
RNF144AP50876 AL031736.1-201ENST00000449688 618 ntBASIC6.96□□□□□ -1.3
RNF144AP50876 AL672138.1-201ENST00000450604 1015 ntBASIC6.96□□□□□ -1.3
RNF144AP50876 AL157400.2-201ENST00000454174 563 ntTSL 2 BASIC6.96□□□□□ -1.3
RNF144AP50876 AL133480.2-201ENST00000456723 487 ntBASIC6.96□□□□□ -1.3
RNF144AP50876 AC096922.1-201ENST00000461635 651 ntBASIC6.96□□□□□ -1.3
RNF144AP50876 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC6.96□□□□□ -1.3
RNF144AP50876 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.96□□□□□ -1.3
RNF144AP50876 RN7SL635P-201ENST00000492123 296 ntBASIC6.96□□□□□ -1.3
RNF144AP50876 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
RNF144AP50876 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC6.96□□□□□ -1.3
RNF144AP50876 AC093325.1-201ENST00000508378 326 ntBASIC6.96□□□□□ -1.3
RNF144AP50876 Y_RNA.691-201ENST00000516611 103 ntBASIC6.96□□□□□ -1.3
RNF144AP50876 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.96□□□□□ -1.3
RNF144AP50876 AC138832.1-201ENST00000522871 556 ntBASIC6.96□□□□□ -1.3
RNF144AP50876 AC092818.1-201ENST00000523411 639 ntTSL 3 BASIC6.96□□□□□ -1.3
RNF144AP50876 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC6.96□□□□□ -1.3
RNF144AP50876 AL135934.1-201ENST00000527684 537 ntTSL 2 BASIC6.96□□□□□ -1.3
RNF144AP50876 AC027026.1-201ENST00000532323 742 ntBASIC6.96□□□□□ -1.3
RNF144AP50876 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
RNF144AP50876 NANOGNBP2-201ENST00000544753 553 ntBASIC6.96□□□□□ -1.3
RNF144AP50876 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC6.96□□□□□ -1.3
RNF144AP50876 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC6.96□□□□□ -1.3
RNF144AP50876 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC6.96□□□□□ -1.3
RNF144AP50876 AC009117.1-201ENST00000563948 554 ntBASIC6.96□□□□□ -1.3
RNF144AP50876 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC6.96□□□□□ -1.3
RNF144AP50876 AC006270.2-201ENST00000578523 652 ntBASIC6.96□□□□□ -1.3
RNF144AP50876 RN7SL664P-201ENST00000584239 305 ntBASIC6.96□□□□□ -1.3
RNF144AP50876 MIAT_exon1.1-201ENST00000617016 135 ntBASIC6.96□□□□□ -1.3
RNF144AP50876 AC087588.2-201ENST00000617667 426 ntBASIC6.96□□□□□ -1.3
RNF144AP50876 AC040168.1-201ENST00000623594 991 ntBASIC6.96□□□□□ -1.3
RNF144AP50876 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC6.96□□□□□ -1.3
RNF144AP50876 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC6.96□□□□□ -1.3
RNF144AP50876 AL596275.2-203ENST00000641951 371 ntBASIC6.96□□□□□ -1.3
RNF144AP50876 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC6.96□□□□□ -1.3
RNF144AP50876 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC6.96□□□□□ -1.3
RNF144AP50876 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
RNF144AP50876 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC6.96□□□□□ -1.3
RNF144AP50876 AL133320.1-201ENST00000621423 2352 ntBASIC6.96□□□□□ -1.3
RNF144AP50876 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.96□□□□□ -1.3
RNF144AP50876 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC6.96□□□□□ -1.3
RNF144AP50876 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
RNF144AP50876 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC6.96□□□□□ -1.3
RNF144AP50876 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
RNF144AP50876 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
RNF144AP50876 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.96□□□□□ -1.3
RNF144AP50876 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
RNF144AP50876 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
RNF144AP50876 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC6.95□□□□□ -1.3
RNF144AP50876 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
RNF144AP50876 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
RNF144AP50876 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RNF144AP50876 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.95□□□□□ -1.3
RNF144AP50876 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RNF144AP50876 SALL4P7-201ENST00000555779 3120 ntBASIC6.95□□□□□ -1.3
RNF144AP50876 CSNK2A3-201ENST00000528848 1416 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
RNF144AP50876 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
RNF144AP50876 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
RNF144AP50876 AC012213.2-201ENST00000562917 4597 ntBASIC6.95□□□□□ -1.3
RNF144AP50876 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RNF144AP50876 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RNF144AP50876 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
RNF144AP50876 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RNF144AP50876 RNU6-223P-201ENST00000362830 107 ntBASIC6.95□□□□□ -1.3
RNF144AP50876 SNORD46-201ENST00000364043 104 ntBASIC6.95□□□□□ -1.3
RNF144AP50876 AC068050.1-201ENST00000394891 380 ntBASIC6.95□□□□□ -1.3
RNF144AP50876 RN7SKP89-201ENST00000410774 242 ntBASIC6.95□□□□□ -1.3
RNF144AP50876 MTATP6P18-201ENST00000417994 673 ntBASIC6.95□□□□□ -1.3
RNF144AP50876 DPY19L1P2-201ENST00000426647 915 ntBASIC6.95□□□□□ -1.3
RNF144AP50876 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC6.95□□□□□ -1.3
RNF144AP50876 RPEP2-201ENST00000432149 701 ntBASIC6.95□□□□□ -1.3
RNF144AP50876 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC6.95□□□□□ -1.3
RNF144AP50876 RPL7P59-201ENST00000447700 943 ntBASIC6.95□□□□□ -1.3
RNF144AP50876 NDUFA5P7-201ENST00000452914 242 ntBASIC6.95□□□□□ -1.3
RNF144AP50876 ST13P21-201ENST00000453250 1098 ntBASIC6.95□□□□□ -1.3
RNF144AP50876 AC007879.2-201ENST00000454444 551 ntTSL 4 BASIC6.95□□□□□ -1.3
RNF144AP50876 AL583843.1-201ENST00000456070 346 ntBASIC6.95□□□□□ -1.3
RNF144AP50876 RNU6-261P-201ENST00000459506 102 ntBASIC6.95□□□□□ -1.3
RNF144AP50876 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC6.95□□□□□ -1.3
RNF144AP50876 MRPS17P3-201ENST00000465453 385 ntBASIC6.95□□□□□ -1.3
RNF144AP50876 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC6.95□□□□□ -1.3
RNF144AP50876 RPL7P39-201ENST00000481157 744 ntBASIC6.95□□□□□ -1.3
RNF144AP50876 LEMD1-208ENST00000495594 637 ntTSL 3 BASIC6.95□□□□□ -1.3
RNF144AP50876 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC6.95□□□□□ -1.3
RNF144AP50876 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.95□□□□□ -1.3
RNF144AP50876 RNU6-1334P-201ENST00000516032 105 ntBASIC6.95□□□□□ -1.3
RNF144AP50876 RNU6-150P-201ENST00000516237 95 ntBASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms