Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CSNK1A1P48729 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CSNK1A1P48729 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.56□□□□□ -1.68
CSNK1A1P48729 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.56□□□□□ -1.68
CSNK1A1P48729 NPM1P40-201ENST00000412758 733 ntBASIC4.56□□□□□ -1.68
CSNK1A1P48729 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.56□□□□□ -1.68
CSNK1A1P48729 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.56□□□□□ -1.68
CSNK1A1P48729 CYCSP24-201ENST00000445119 316 ntBASIC4.56□□□□□ -1.68
CSNK1A1P48729 RN7SL443P-201ENST00000464331 290 ntBASIC4.56□□□□□ -1.68
CSNK1A1P48729 COPS8P2-201ENST00000473228 627 ntBASIC4.56□□□□□ -1.68
CSNK1A1P48729 RN7SL30P-201ENST00000488416 306 ntBASIC4.56□□□□□ -1.68
CSNK1A1P48729 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.56□□□□□ -1.68
CSNK1A1P48729 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.56□□□□□ -1.68
CSNK1A1P48729 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.56□□□□□ -1.68
CSNK1A1P48729 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC4.56□□□□□ -1.68
CSNK1A1P48729 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.56□□□□□ -1.68
CSNK1A1P48729 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CSNK1A1P48729 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.56□□□□□ -1.68
CSNK1A1P48729 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.56□□□□□ -1.68
CSNK1A1P48729 AC018552.1-201ENST00000562099 811 ntBASIC4.56□□□□□ -1.68
CSNK1A1P48729 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.56□□□□□ -1.68
CSNK1A1P48729 MIR4472-2-201ENST00000582069 67 ntBASIC4.56□□□□□ -1.68
CSNK1A1P48729 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC4.56□□□□□ -1.68
CSNK1A1P48729 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.56□□□□□ -1.68
CSNK1A1P48729 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.56□□□□□ -1.68
CSNK1A1P48729 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.56□□□□□ -1.68
CSNK1A1P48729 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.56□□□□□ -1.68
CSNK1A1P48729 AL121890.2-201ENST00000617644 465 ntBASIC4.56□□□□□ -1.68
CSNK1A1P48729 AP001005.3-201ENST00000622049 129 ntBASIC4.56□□□□□ -1.68
CSNK1A1P48729 AC004808.2-201ENST00000627965 773 ntBASIC4.56□□□□□ -1.68
CSNK1A1P48729 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.56□□□□□ -1.68
CSNK1A1P48729 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CSNK1A1P48729 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CSNK1A1P48729 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
CSNK1A1P48729 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.56□□□□□ -1.68
CSNK1A1P48729 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CSNK1A1P48729 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.56□□□□□ -1.68
CSNK1A1P48729 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CSNK1A1P48729 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.56□□□□□ -1.68
CSNK1A1P48729 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CSNK1A1P48729 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.55□□□□□ -1.68
CSNK1A1P48729 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CSNK1A1P48729 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CSNK1A1P48729 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CSNK1A1P48729 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CSNK1A1P48729 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.55□□□□□ -1.68
CSNK1A1P48729 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CSNK1A1P48729 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CSNK1A1P48729 RNU6-1263P-201ENST00000384601 106 ntBASIC4.55□□□□□ -1.68
CSNK1A1P48729 MIR223-201ENST00000385204 110 ntBASIC4.55□□□□□ -1.68
CSNK1A1P48729 AC092642.1-201ENST00000392417 425 ntBASIC4.55□□□□□ -1.68
CSNK1A1P48729 OR51A6P-201ENST00000418680 1004 ntBASIC4.55□□□□□ -1.68
CSNK1A1P48729 NANOGP4-201ENST00000427230 913 ntBASIC4.55□□□□□ -1.68
CSNK1A1P48729 AC245047.2-201ENST00000441060 530 ntBASIC4.55□□□□□ -1.68
CSNK1A1P48729 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.55□□□□□ -1.68
CSNK1A1P48729 AL591363.1-201ENST00000450091 483 ntBASIC4.55□□□□□ -1.68
CSNK1A1P48729 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CSNK1A1P48729 HSPE1P22-201ENST00000456856 327 ntBASIC4.55□□□□□ -1.68
CSNK1A1P48729 AC245028.2-201ENST00000458673 253 ntBASIC4.55□□□□□ -1.68
CSNK1A1P48729 RN7SL172P-201ENST00000460535 303 ntBASIC4.55□□□□□ -1.68
CSNK1A1P48729 NIFKP7-201ENST00000503365 834 ntBASIC4.55□□□□□ -1.68
CSNK1A1P48729 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.55□□□□□ -1.68
CSNK1A1P48729 AC011411.1-201ENST00000509592 876 ntBASIC4.55□□□□□ -1.68
CSNK1A1P48729 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CSNK1A1P48729 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.55□□□□□ -1.68
CSNK1A1P48729 MIR4489-201ENST00000578869 62 ntBASIC4.55□□□□□ -1.68
CSNK1A1P48729 SNORD39.2-201ENST00000579995 76 ntBASIC4.55□□□□□ -1.68
CSNK1A1P48729 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.55□□□□□ -1.68
CSNK1A1P48729 AC022960.2-201ENST00000616300 666 ntBASIC4.55□□□□□ -1.68
CSNK1A1P48729 MIR6826-201ENST00000617808 98 ntBASIC4.55□□□□□ -1.68
CSNK1A1P48729 MIR6729-201ENST00000618194 65 ntBASIC4.55□□□□□ -1.68
CSNK1A1P48729 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.55□□□□□ -1.68
CSNK1A1P48729 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.55□□□□□ -1.68
CSNK1A1P48729 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CSNK1A1P48729 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CSNK1A1P48729 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CSNK1A1P48729 ZNF733P-202ENST00000444809 1573 ntBASIC4.55□□□□□ -1.68
CSNK1A1P48729 PABPC1P6-201ENST00000445594 1829 ntBASIC4.55□□□□□ -1.68
CSNK1A1P48729 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CSNK1A1P48729 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.54□□□□□ -1.68
CSNK1A1P48729 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CSNK1A1P48729 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CSNK1A1P48729 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
CSNK1A1P48729 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.54□□□□□ -1.68
CSNK1A1P48729 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CSNK1A1P48729 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CSNK1A1P48729 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
CSNK1A1P48729 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.54□□□□□ -1.68
CSNK1A1P48729 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.54□□□□□ -1.68
CSNK1A1P48729 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CSNK1A1P48729 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CSNK1A1P48729 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.54□□□□□ -1.68
CSNK1A1P48729 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
CSNK1A1P48729 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.54□□□□□ -1.68
CSNK1A1P48729 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CSNK1A1P48729 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CSNK1A1P48729 SNORA2.3-201ENST00000383920 135 ntBASIC4.54□□□□□ -1.68
CSNK1A1P48729 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.54□□□□□ -1.68
CSNK1A1P48729 MARK2P12-201ENST00000420129 585 ntBASIC4.54□□□□□ -1.68
CSNK1A1P48729 RPL12P43-201ENST00000420608 499 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms