Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.04□□□□□ -1.44
HOXC12P31275 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
HOXC12P31275 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC12P31275 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC12P31275 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
HOXC12P31275 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC12P31275 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC6.04□□□□□ -1.44
HOXC12P31275 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC12P31275 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
HOXC12P31275 SPATA31C2-201ENST00000324915 3777 ntBASIC6.04□□□□□ -1.44
HOXC12P31275 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC12P31275 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
HOXC12P31275 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC12P31275 RNA5SP65-201ENST00000363166 119 ntBASIC6.04□□□□□ -1.44
HOXC12P31275 RNU6-1066P-201ENST00000363573 105 ntBASIC6.04□□□□□ -1.44
HOXC12P31275 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC12P31275 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC12P31275 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC12P31275 RPL23AP47-201ENST00000408017 460 ntBASIC6.04□□□□□ -1.44
HOXC12P31275 RNA5SP155-201ENST00000411154 129 ntBASIC6.04□□□□□ -1.44
HOXC12P31275 AL450992.3-201ENST00000413192 568 ntBASIC6.04□□□□□ -1.44
HOXC12P31275 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC12P31275 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.04□□□□□ -1.44
HOXC12P31275 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC6.04□□□□□ -1.44
HOXC12P31275 NDUFS5P5-201ENST00000437256 321 ntBASIC6.04□□□□□ -1.44
HOXC12P31275 PCBP2P1-201ENST00000437262 977 ntBASIC6.04□□□□□ -1.44
HOXC12P31275 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC12P31275 HMGN1P6-201ENST00000438508 291 ntBASIC6.04□□□□□ -1.44
HOXC12P31275 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.04□□□□□ -1.44
HOXC12P31275 ARAFP2-201ENST00000440565 559 ntBASIC6.04□□□□□ -1.44
HOXC12P31275 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.04□□□□□ -1.44
HOXC12P31275 OR51P1P-201ENST00000447547 942 ntBASIC6.04□□□□□ -1.44
HOXC12P31275 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC6.04□□□□□ -1.44
HOXC12P31275 GYG1P1-201ENST00000460864 698 ntBASIC6.04□□□□□ -1.44
HOXC12P31275 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC6.04□□□□□ -1.44
HOXC12P31275 AC135721.2-201ENST00000464237 300 ntBASIC6.04□□□□□ -1.44
HOXC12P31275 AC079841.1-201ENST00000481228 950 ntBASIC6.04□□□□□ -1.44
HOXC12P31275 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC6.04□□□□□ -1.44
HOXC12P31275 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
HOXC12P31275 B3GNTL1P1-201ENST00000509174 289 ntBASIC6.04□□□□□ -1.44
HOXC12P31275 AC048346.1-201ENST00000510247 144 ntBASIC6.04□□□□□ -1.44
HOXC12P31275 AC110775.1-201ENST00000513721 462 ntBASIC6.04□□□□□ -1.44
HOXC12P31275 MTCYBP44-201ENST00000514835 823 ntBASIC6.04□□□□□ -1.44
HOXC12P31275 DUXAP2-201ENST00000519198 589 ntBASIC6.04□□□□□ -1.44
HOXC12P31275 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.04□□□□□ -1.44
HOXC12P31275 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC6.04□□□□□ -1.44
HOXC12P31275 AP001207.1-201ENST00000524051 481 ntBASIC6.04□□□□□ -1.44
HOXC12P31275 MTCYBP41-201ENST00000528913 1123 ntBASIC6.04□□□□□ -1.44
HOXC12P31275 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC6.04□□□□□ -1.44
HOXC12P31275 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
HOXC12P31275 OR7K1P-201ENST00000546439 926 ntBASIC6.04□□□□□ -1.44
HOXC12P31275 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC6.04□□□□□ -1.44
HOXC12P31275 NPM1P47-201ENST00000560843 856 ntBASIC6.04□□□□□ -1.44
HOXC12P31275 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC6.04□□□□□ -1.44
HOXC12P31275 AP005262.1-201ENST00000582646 997 ntBASIC6.04□□□□□ -1.44
HOXC12P31275 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.04□□□□□ -1.44
HOXC12P31275 AC012360.2-201ENST00000609349 391 ntBASIC6.04□□□□□ -1.44
HOXC12P31275 AC008498.1-201ENST00000613012 531 ntBASIC6.04□□□□□ -1.44
HOXC12P31275 AC025588.4-201ENST00000615802 908 ntBASIC6.04□□□□□ -1.44
HOXC12P31275 AL683826.1-201ENST00000624104 627 ntBASIC6.04□□□□□ -1.44
HOXC12P31275 AC005858.3-201ENST00000624756 589 ntBASIC6.04□□□□□ -1.44
HOXC12P31275 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC6.04□□□□□ -1.44
HOXC12P31275 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
HOXC12P31275 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
HOXC12P31275 AC093225.1-201ENST00000506867 1408 ntBASIC6.04□□□□□ -1.44
HOXC12P31275 AL031651.1-201ENST00000615357 1438 ntBASIC6.04□□□□□ -1.44
HOXC12P31275 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.04□□□□□ -1.44
HOXC12P31275 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.04□□□□□ -1.44
HOXC12P31275 AC046144.1-201ENST00000478559 1853 ntBASIC6.04□□□□□ -1.44
HOXC12P31275 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC12P31275 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC12P31275 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.04□□□□□ -1.44
HOXC12P31275 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC12P31275 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC12P31275 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.04□□□□□ -1.44
HOXC12P31275 AC092725.2-201ENST00000567658 1389 ntBASIC6.04□□□□□ -1.44
HOXC12P31275 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC12P31275 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC12P31275 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC12P31275 AP002800.1-201ENST00000624982 2225 ntBASIC6.03□□□□□ -1.44
HOXC12P31275 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC6.03□□□□□ -1.44
HOXC12P31275 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC12P31275 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.03□□□□□ -1.44
HOXC12P31275 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC12P31275 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC12P31275 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC12P31275 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC12P31275 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC12P31275 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC6.03□□□□□ -1.44
HOXC12P31275 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.03□□□□□ -1.44
HOXC12P31275 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.03□□□□□ -1.44
HOXC12P31275 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.03□□□□□ -1.44
HOXC12P31275 ANKRD36BP1-202ENST00000604892 1417 ntBASIC6.03□□□□□ -1.44
HOXC12P31275 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC12P31275 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC12P31275 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC12P31275 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.03□□□□□ -1.44
HOXC12P31275 RNA5SP382-201ENST00000363355 112 ntBASIC6.03□□□□□ -1.44
HOXC12P31275 RN7SKP47-201ENST00000365347 328 ntBASIC6.03□□□□□ -1.44
HOXC12P31275 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms