Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC026458.1-201ENST00000564330 438 ntBASIC7.54□□□□□ -1.2
RFX1P22670 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC7.54□□□□□ -1.2
RFX1P22670 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC7.54□□□□□ -1.2
RFX1P22670 MIR4312-201ENST00000579909 76 ntBASIC7.54□□□□□ -1.2
RFX1P22670 MIR4310-201ENST00000582950 57 ntBASIC7.54□□□□□ -1.2
RFX1P22670 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC7.54□□□□□ -1.2
RFX1P22670 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC7.54□□□□□ -1.2
RFX1P22670 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC7.54□□□□□ -1.2
RFX1P22670 AL135999.3-201ENST00000610501 812 ntBASIC7.54□□□□□ -1.2
RFX1P22670 uc_338.9-201ENST00000617424 182 ntBASIC7.54□□□□□ -1.2
RFX1P22670 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC7.54□□□□□ -1.2
RFX1P22670 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC7.54□□□□□ -1.2
RFX1P22670 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
RFX1P22670 OFD1P5Y-201ENST00000447585 2590 ntBASIC7.54□□□□□ -1.2
RFX1P22670 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC7.54□□□□□ -1.2
RFX1P22670 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
RFX1P22670 AC129502.1-201ENST00000623261 1654 ntBASIC7.54□□□□□ -1.2
RFX1P22670 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
RFX1P22670 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RFX1P22670 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC7.53□□□□□ -1.2
RFX1P22670 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
RFX1P22670 OFD1P8Y-201ENST00000449148 1433 ntBASIC7.53□□□□□ -1.2
RFX1P22670 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC7.53□□□□□ -1.2
RFX1P22670 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RFX1P22670 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RFX1P22670 AC022031.1-201ENST00000585985 2593 ntBASIC7.53□□□□□ -1.2
RFX1P22670 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC7.53□□□□□ -1.2
RFX1P22670 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RFX1P22670 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RFX1P22670 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RFX1P22670 SNORA70.5-201ENST00000365519 135 ntBASIC7.53□□□□□ -1.2
RFX1P22670 AC092634.1-201ENST00000366505 199 ntBASIC7.53□□□□□ -1.2
RFX1P22670 CUBN-201ENST00000377823 705 ntTSL 3 BASIC7.53□□□□□ -1.2
RFX1P22670 RNU6-723P-201ENST00000383973 107 ntBASIC7.53□□□□□ -1.2
RFX1P22670 RNU6-1122P-201ENST00000384449 107 ntBASIC7.53□□□□□ -1.2
RFX1P22670 MIR181A1-201ENST00000385026 110 ntBASIC7.53□□□□□ -1.2
RFX1P22670 RPL9P21-201ENST00000392269 505 ntBASIC7.53□□□□□ -1.2
RFX1P22670 MIR541-201ENST00000401360 84 ntBASIC7.53□□□□□ -1.2
RFX1P22670 AL589647.1-201ENST00000402485 466 ntBASIC7.53□□□□□ -1.2
RFX1P22670 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC7.53□□□□□ -1.2
RFX1P22670 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC7.53□□□□□ -1.2
RFX1P22670 TMBIM7P-201ENST00000418074 855 ntBASIC7.53□□□□□ -1.2
RFX1P22670 NIPA2P1-201ENST00000426223 976 ntBASIC7.53□□□□□ -1.2
RFX1P22670 AP003385.1-201ENST00000426387 893 ntBASIC7.53□□□□□ -1.2
RFX1P22670 MTCO2P19-201ENST00000427513 598 ntBASIC7.53□□□□□ -1.2
RFX1P22670 B3GNT2P1-201ENST00000434960 952 ntBASIC7.53□□□□□ -1.2
RFX1P22670 TRIM60P16-201ENST00000444048 694 ntBASIC7.53□□□□□ -1.2
RFX1P22670 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC7.53□□□□□ -1.2
RFX1P22670 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC7.53□□□□□ -1.2
RFX1P22670 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC7.53□□□□□ -1.2
RFX1P22670 AL671855.1-201ENST00000446875 1203 ntBASIC7.53□□□□□ -1.2
RFX1P22670 PAXBP1P1-201ENST00000449315 447 ntBASIC7.53□□□□□ -1.2
RFX1P22670 NPM1P39-201ENST00000449818 867 ntBASIC7.53□□□□□ -1.2
RFX1P22670 RPL21P71-201ENST00000465598 459 ntBASIC7.53□□□□□ -1.2
RFX1P22670 RPL23AP12-201ENST00000467573 473 ntBASIC7.53□□□□□ -1.2
RFX1P22670 AP000797.1-201ENST00000478870 387 ntBASIC7.53□□□□□ -1.2
RFX1P22670 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC7.53□□□□□ -1.2
RFX1P22670 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC7.53□□□□□ -1.2
RFX1P22670 MTCYBP43-201ENST00000513621 740 ntBASIC7.53□□□□□ -1.2
RFX1P22670 RNU6-718P-201ENST00000516166 105 ntBASIC7.53□□□□□ -1.2
RFX1P22670 SCARNA6.1-201ENST00000516989 238 ntBASIC7.53□□□□□ -1.2
RFX1P22670 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC7.53□□□□□ -1.2
RFX1P22670 DEFB108A-201ENST00000530110 222 ntBASIC7.53□□□□□ -1.2
RFX1P22670 AP002453.2-201ENST00000533503 320 ntBASIC7.53□□□□□ -1.2
RFX1P22670 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC7.53□□□□□ -1.2
RFX1P22670 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC7.53□□□□□ -1.2
RFX1P22670 AC091489.2-201ENST00000566263 604 ntBASIC7.53□□□□□ -1.2
RFX1P22670 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC7.53□□□□□ -1.2
RFX1P22670 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC7.53□□□□□ -1.2
RFX1P22670 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC7.53□□□□□ -1.2
RFX1P22670 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC7.53□□□□□ -1.2
RFX1P22670 AC007255.2-201ENST00000604053 631 ntBASIC7.53□□□□□ -1.2
RFX1P22670 AL390877.1-201ENST00000605704 214 ntBASIC7.53□□□□□ -1.2
RFX1P22670 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC7.53□□□□□ -1.2
RFX1P22670 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC7.53□□□□□ -1.2
RFX1P22670 AC114546.4-201ENST00000624413 369 ntBASIC7.53□□□□□ -1.2
RFX1P22670 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC7.53□□□□□ -1.2
RFX1P22670 AL354702.2-202ENST00000641481 890 ntBASIC7.53□□□□□ -1.2
RFX1P22670 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RFX1P22670 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.53□□□□□ -1.2
RFX1P22670 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC7.53□□□□□ -1.2
RFX1P22670 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RFX1P22670 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
RFX1P22670 AC073544.1-201ENST00000600110 1595 ntBASIC7.53□□□□□ -1.2
RFX1P22670 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC7.53□□□□□ -1.2
RFX1P22670 CR848007.1-201ENST00000442354 1699 ntBASIC7.53□□□□□ -1.2
RFX1P22670 AC137056.2-201ENST00000624055 1958 ntBASIC7.53□□□□□ -1.2
RFX1P22670 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
RFX1P22670 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC7.53□□□□□ -1.2
RFX1P22670 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
RFX1P22670 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RFX1P22670 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
RFX1P22670 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC7.53□□□□□ -1.2
RFX1P22670 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC7.53□□□□□ -1.2
RFX1P22670 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RFX1P22670 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
RFX1P22670 AC125238.2-201ENST00000430003 1440 ntBASIC7.52□□□□□ -1.2
RFX1P22670 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.2
RFX1P22670 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.2
RFX1P22670 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms