Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.95□□□□□ -1.62
HLA-DQB2P05538 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.95□□□□□ -1.62
HLA-DQB2P05538 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.95□□□□□ -1.62
HLA-DQB2P05538 AC090686.1-201ENST00000481577 749 ntBASIC4.95□□□□□ -1.62
HLA-DQB2P05538 MORF4L2P1-201ENST00000503761 858 ntBASIC4.95□□□□□ -1.62
HLA-DQB2P05538 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DQB2P05538 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DQB2P05538 AC008033.2-201ENST00000542626 177 ntBASIC4.95□□□□□ -1.62
HLA-DQB2P05538 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
HLA-DQB2P05538 NPM1P45-201ENST00000583151 559 ntBASIC4.95□□□□□ -1.62
HLA-DQB2P05538 AC010424.2-201ENST00000607594 443 ntBASIC4.95□□□□□ -1.62
HLA-DQB2P05538 AC090510.2-201ENST00000617465 629 ntBASIC4.95□□□□□ -1.62
HLA-DQB2P05538 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DQB2P05538 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DQB2P05538 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DQB2P05538 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.95□□□□□ -1.62
HLA-DQB2P05538 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DQB2P05538 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DQB2P05538 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DQB2P05538 ZNF652P1-201ENST00000442420 1309 ntBASIC4.95□□□□□ -1.62
HLA-DQB2P05538 CR383656.5-201ENST00000547616 1340 ntBASIC4.95□□□□□ -1.62
HLA-DQB2P05538 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
HLA-DQB2P05538 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
HLA-DQB2P05538 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HLA-DQB2P05538 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DQB2P05538 AC125336.1-201ENST00000508893 2827 ntBASIC4.94□□□□□ -1.62
HLA-DQB2P05538 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.94□□□□□ -1.62
HLA-DQB2P05538 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.94□□□□□ -1.62
HLA-DQB2P05538 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.94□□□□□ -1.62
HLA-DQB2P05538 AL109941.1-201ENST00000401925 229 ntBASIC4.94□□□□□ -1.62
HLA-DQB2P05538 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.94□□□□□ -1.62
HLA-DQB2P05538 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DQB2P05538 TMBIM7P-201ENST00000418074 855 ntBASIC4.94□□□□□ -1.62
HLA-DQB2P05538 RGS17P1-201ENST00000423358 553 ntBASIC4.94□□□□□ -1.62
HLA-DQB2P05538 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DQB2P05538 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.94□□□□□ -1.62
HLA-DQB2P05538 PRPF38AP2-201ENST00000438179 851 ntBASIC4.94□□□□□ -1.62
HLA-DQB2P05538 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DQB2P05538 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.94□□□□□ -1.62
HLA-DQB2P05538 Y_RNA.719-201ENST00000517156 106 ntBASIC4.94□□□□□ -1.62
HLA-DQB2P05538 RNU6-709P-201ENST00000517257 104 ntBASIC4.94□□□□□ -1.62
HLA-DQB2P05538 GTF2IP11-201ENST00000526931 420 ntBASIC4.94□□□□□ -1.62
HLA-DQB2P05538 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.94□□□□□ -1.62
HLA-DQB2P05538 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.94□□□□□ -1.62
HLA-DQB2P05538 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.94□□□□□ -1.62
HLA-DQB2P05538 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.94□□□□□ -1.62
HLA-DQB2P05538 AC016839.1-201ENST00000578162 867 ntBASIC4.94□□□□□ -1.62
HLA-DQB2P05538 AC133644.2-201ENST00000608142 540 ntBASIC4.94□□□□□ -1.62
HLA-DQB2P05538 AP001521.2-201ENST00000608772 546 ntBASIC4.94□□□□□ -1.62
HLA-DQB2P05538 AC241377.1-201ENST00000619797 406 ntBASIC4.94□□□□□ -1.62
HLA-DQB2P05538 AC087385.3-201ENST00000620477 187 ntBASIC4.94□□□□□ -1.62
HLA-DQB2P05538 AL353684.1-201ENST00000622677 1120 ntBASIC4.94□□□□□ -1.62
HLA-DQB2P05538 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.94□□□□□ -1.62
HLA-DQB2P05538 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.94□□□□□ -1.62
HLA-DQB2P05538 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.94□□□□□ -1.62
HLA-DQB2P05538 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC4.94□□□□□ -1.62
HLA-DQB2P05538 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DQB2P05538 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DQB2P05538 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.94□□□□□ -1.62
HLA-DQB2P05538 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DQB2P05538 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DQB2P05538 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DQB2P05538 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DQB2P05538 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HLA-DQB2P05538 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DQB2P05538 TET1P1-201ENST00000426627 2301 ntBASIC4.94□□□□□ -1.62
HLA-DQB2P05538 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DQB2P05538 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC4.93□□□□□ -1.62
HLA-DQB2P05538 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.93□□□□□ -1.62
HLA-DQB2P05538 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DQB2P05538 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
HLA-DQB2P05538 THAP12P5-201ENST00000405864 2275 ntBASIC4.93□□□□□ -1.62
HLA-DQB2P05538 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DQB2P05538 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
HLA-DQB2P05538 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DQB2P05538 SNORA51.8-201ENST00000384234 132 ntBASIC4.93□□□□□ -1.62
HLA-DQB2P05538 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DQB2P05538 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.93□□□□□ -1.62
HLA-DQB2P05538 SUMO2P1-206ENST00000445436 284 ntBASIC4.93□□□□□ -1.62
HLA-DQB2P05538 AC012512.1-201ENST00000446594 718 ntBASIC4.93□□□□□ -1.62
HLA-DQB2P05538 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.93□□□□□ -1.62
HLA-DQB2P05538 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.93□□□□□ -1.62
HLA-DQB2P05538 RN7SL558P-201ENST00000497468 299 ntBASIC4.93□□□□□ -1.62
HLA-DQB2P05538 GAPDHP56-201ENST00000506031 988 ntBASIC4.93□□□□□ -1.62
HLA-DQB2P05538 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC4.93□□□□□ -1.62
HLA-DQB2P05538 RNA5SP249-201ENST00000516127 99 ntBASIC4.93□□□□□ -1.62
HLA-DQB2P05538 AC021006.3-201ENST00000530771 192 ntBASIC4.93□□□□□ -1.62
HLA-DQB2P05538 AC005000.1-201ENST00000536192 288 ntBASIC4.93□□□□□ -1.62
HLA-DQB2P05538 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.93□□□□□ -1.62
HLA-DQB2P05538 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC4.93□□□□□ -1.62
HLA-DQB2P05538 SNORA74C-1-201ENST00000580726 201 ntBASIC4.93□□□□□ -1.62
HLA-DQB2P05538 AP000919.1-201ENST00000582850 985 ntBASIC4.93□□□□□ -1.62
HLA-DQB2P05538 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.93□□□□□ -1.62
HLA-DQB2P05538 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.93□□□□□ -1.62
HLA-DQB2P05538 AC211433.2-201ENST00000608433 387 ntBASIC4.93□□□□□ -1.62
HLA-DQB2P05538 AC012414.7-202ENST00000622705 1090 ntBASIC4.93□□□□□ -1.62
HLA-DQB2P05538 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DQB2P05538 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DQB2P05538 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DQB2P05538 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms