Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC079395.2-201ENST00000610982 737 ntBASIC4.98□□□□□ -1.61
SSX4O60224 RN7SL544P-201ENST00000617232 284 ntBASIC4.98□□□□□ -1.61
SSX4O60224 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.98□□□□□ -1.61
SSX4O60224 RN7SL763P-201ENST00000620922 284 ntBASIC4.98□□□□□ -1.61
SSX4O60224 AC095038.2-201ENST00000621464 1070 ntBASIC4.98□□□□□ -1.61
SSX4O60224 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.98□□□□□ -1.61
SSX4O60224 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
SSX4O60224 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
SSX4O60224 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC4.98□□□□□ -1.61
SSX4O60224 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SSX4O60224 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.98□□□□□ -1.61
SSX4O60224 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.98□□□□□ -1.61
SSX4O60224 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SSX4O60224 ZNF90P1-201ENST00000480493 1951 ntBASIC4.98□□□□□ -1.61
SSX4O60224 AL121950.1-201ENST00000624993 2077 ntBASIC4.98□□□□□ -1.61
SSX4O60224 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.98□□□□□ -1.61
SSX4O60224 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SSX4O60224 MTCO1P15-201ENST00000529569 1526 ntBASIC4.97□□□□□ -1.61
SSX4O60224 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SSX4O60224 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
SSX4O60224 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SSX4O60224 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
SSX4O60224 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.97□□□□□ -1.61
SSX4O60224 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SSX4O60224 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SSX4O60224 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SSX4O60224 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SSX4O60224 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SSX4O60224 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
SSX4O60224 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SSX4O60224 ATP5HP3-201ENST00000396994 486 ntBASIC4.97□□□□□ -1.61
SSX4O60224 ATP5F1P6-201ENST00000402768 767 ntBASIC4.97□□□□□ -1.61
SSX4O60224 NPM1P40-201ENST00000412758 733 ntBASIC4.97□□□□□ -1.61
SSX4O60224 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.97□□□□□ -1.61
SSX4O60224 BMS1P13-201ENST00000417301 885 ntBASIC4.97□□□□□ -1.61
SSX4O60224 RPS4XP5-201ENST00000419038 768 ntBASIC4.97□□□□□ -1.61
SSX4O60224 AL355433.1-201ENST00000422804 300 ntBASIC4.97□□□□□ -1.61
SSX4O60224 RPS6P14-201ENST00000425165 719 ntBASIC4.97□□□□□ -1.61
SSX4O60224 HSPE1P16-201ENST00000426640 348 ntBASIC4.97□□□□□ -1.61
SSX4O60224 AC099677.3-201ENST00000427081 395 ntBASIC4.97□□□□□ -1.61
SSX4O60224 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC4.97□□□□□ -1.61
SSX4O60224 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
SSX4O60224 BX119904.1-201ENST00000432026 348 ntBASIC4.97□□□□□ -1.61
SSX4O60224 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.97□□□□□ -1.61
SSX4O60224 OR52E3P-201ENST00000452083 936 ntBASIC4.97□□□□□ -1.61
SSX4O60224 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.97□□□□□ -1.61
SSX4O60224 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC4.97□□□□□ -1.61
SSX4O60224 AC093166.4-201ENST00000457867 318 ntBASIC4.97□□□□□ -1.61
SSX4O60224 SIAH1P1-201ENST00000479411 923 ntBASIC4.97□□□□□ -1.61
SSX4O60224 SYT14P1-201ENST00000481459 721 ntBASIC4.97□□□□□ -1.61
SSX4O60224 AC022215.1-201ENST00000481770 362 ntBASIC4.97□□□□□ -1.61
SSX4O60224 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.97□□□□□ -1.61
SSX4O60224 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.97□□□□□ -1.61
SSX4O60224 AC092902.1-201ENST00000486999 259 ntBASIC4.97□□□□□ -1.61
SSX4O60224 AC069304.1-201ENST00000491593 704 ntBASIC4.97□□□□□ -1.61
SSX4O60224 MTCO2P9-201ENST00000503214 694 ntBASIC4.97□□□□□ -1.61
SSX4O60224 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.97□□□□□ -1.61
SSX4O60224 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SSX4O60224 AC021193.1-201ENST00000511607 420 ntBASIC4.97□□□□□ -1.61
SSX4O60224 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.97□□□□□ -1.61
SSX4O60224 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.97□□□□□ -1.61
SSX4O60224 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SSX4O60224 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.97□□□□□ -1.61
SSX4O60224 AC092709.1-201ENST00000521355 1045 ntBASIC4.97□□□□□ -1.61
SSX4O60224 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.97□□□□□ -1.61
SSX4O60224 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.97□□□□□ -1.61
SSX4O60224 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SSX4O60224 IGBP1P1-201ENST00000554337 1009 ntBASIC4.97□□□□□ -1.61
SSX4O60224 AC025918.2-201ENST00000558683 763 ntBASIC4.97□□□□□ -1.61
SSX4O60224 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SSX4O60224 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.97□□□□□ -1.61
SSX4O60224 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC4.97□□□□□ -1.61
SSX4O60224 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC4.97□□□□□ -1.61
SSX4O60224 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.97□□□□□ -1.61
SSX4O60224 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.97□□□□□ -1.61
SSX4O60224 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.97□□□□□ -1.61
SSX4O60224 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.97□□□□□ -1.61
SSX4O60224 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.97□□□□□ -1.61
SSX4O60224 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.97□□□□□ -1.61
SSX4O60224 AL035661.1-201ENST00000620459 1144 ntBASIC4.97□□□□□ -1.61
SSX4O60224 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.97□□□□□ -1.61
SSX4O60224 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
SSX4O60224 Z95331.1-201ENST00000623075 23112 ntBASIC4.97□□□□□ -1.61
SSX4O60224 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.97□□□□□ -1.61
SSX4O60224 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.97□□□□□ -1.61
SSX4O60224 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.97□□□□□ -1.61
SSX4O60224 AC114947.2-201ENST00000565748 2125 ntBASIC4.97□□□□□ -1.61
SSX4O60224 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC4.97□□□□□ -1.61
SSX4O60224 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SSX4O60224 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SSX4O60224 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
SSX4O60224 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SSX4O60224 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC4.97□□□□□ -1.61
SSX4O60224 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
SSX4O60224 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.96□□□□□ -1.61
SSX4O60224 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
SSX4O60224 AL138820.1-201ENST00000617901 5305 ntBASIC4.96□□□□□ -1.61
SSX4O60224 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
SSX4O60224 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.62
SSX4O60224 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms