Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 RN7SL356P-201ENST00000582228 248 ntBASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 RPL29P33-201ENST00000587474 316 ntBASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 AP000769.2-201ENST00000602344 396 ntBASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 AC090181.2-201ENST00000602975 672 ntBASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 AC009237.13-201ENST00000603193 276 ntBASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 AC010680.3-201ENST00000604215 520 ntBASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 BNIP3P35-201ENST00000604530 490 ntBASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 AC011626.1-201ENST00000604710 562 ntBASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 AC067838.1-201ENST00000606064 577 ntBASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 AC233309.1-201ENST00000619522 751 ntBASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 MTND4P10-201ENST00000446199 1363 ntBASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 MTCO1P14-201ENST00000441695 1559 ntBASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 ZNF733P-202ENST00000444809 1573 ntBASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 EXOC5P1-201ENST00000510543 1969 ntBASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 BX005019.1-201ENST00000561881 1810 ntBASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 AP001002.1-201ENST00000625148 1513 ntBASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 AC005294.1-201ENST00000355509 281 ntBASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 RNU1-65P-201ENST00000363919 148 ntBASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 OR2T4-202ENST00000366475 1047 ntBASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 AC104297.1-201ENST00000393779 870 ntBASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 PCNAP3-201ENST00000397222 778 ntBASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 GLULP6-201ENST00000399502 913 ntBASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 RPL12P23-201ENST00000405880 490 ntBASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 SNX18P13-201ENST00000412442 529 ntBASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 CDY17P-201ENST00000414121 1282 ntBASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 AC002367.1-201ENST00000416765 405 ntBASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 AC092647.1-201ENST00000420654 287 ntBASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 DHRS9-203ENST00000421653 1044 ntTSL 5 BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 KIF4CP-201ENST00000422742 1279 ntBASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 MTND2P11-201ENST00000423638 648 ntBASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 TRBV29OR9-2-201ENST00000427589 333 ntBASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 CDY8P-201ENST00000428380 1279 ntBASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 AC092162.1-201ENST00000432828 434 ntBASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 MAPRE1P3-201ENST00000435438 796 ntBASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 RPSAP41-201ENST00000439695 860 ntBASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 AC090954.1-201ENST00000445502 361 ntBASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 CDY20P-201ENST00000447528 1279 ntBASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 ZNF32-AS1-201ENST00000453284 434 ntTSL 5 BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 RPL5P32-201ENST00000454085 879 ntBASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 HMGB1P4-201ENST00000455362 567 ntBASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 AC079168.1-201ENST00000458741 345 ntBASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 AC018475.1-201ENST00000478358 465 ntBASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 RN7SL57P-201ENST00000493687 290 ntBASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 SNORA70.14-201ENST00000516205 110 ntBASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 SCARNA16.4-201ENST00000516956 187 ntBASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 SCARNA6.1-201ENST00000516989 238 ntBASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 AC021678.3-201ENST00000517893 476 ntBASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 RPL23AP53-201ENST00000521854 457 ntBASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 KCTD9P6-201ENST00000522306 950 ntBASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 WBP1LP3-201ENST00000523033 208 ntBASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 AC064807.3-201ENST00000523810 470 ntTSL 2 BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 TOMM20P2-201ENST00000540082 421 ntBASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 AC091515.1-201ENST00000548110 679 ntBASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 AC079075.1-201ENST00000559543 878 ntBASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms