Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC9.52□□□□□ -0.88
TRIM35Q9UPQ4 TULP4-202ENST00000367097 11295 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
TRIM35Q9UPQ4 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 TAF1-201ENST00000276072 5692 ntAPPRIS P3 TSL 5 BASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 ZIM3-201ENST00000269834 2627 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 RNU6-238P-201ENST00000363313 106 ntBASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 RNU6-1032P-201ENST00000384100 107 ntBASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 RPL23AP29-201ENST00000397284 453 ntBASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 SNORA11D-201ENST00000408548 128 ntBASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 SNORA11E-201ENST00000408778 128 ntBASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 ATP5BP1-201ENST00000411980 1574 ntBASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 VDAC1P2-201ENST00000423609 850 ntBASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 NANOGP6-201ENST00000429190 847 ntBASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 AC097499.1-201ENST00000444277 208 ntBASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 AC099563.1-201ENST00000456086 418 ntBASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 MTCYBP40-201ENST00000509390 1135 ntBASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 PCBP2P3-201ENST00000509726 843 ntBASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 RPL10P18-201ENST00000519384 309 ntBASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 AP003084.1-201ENST00000524828 742 ntBASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 OR4C1P-201ENST00000530880 937 ntBASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 SAA3P-201ENST00000533267 365 ntBASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 NF1P12-201ENST00000549593 583 ntBASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 AC011453.2-201ENST00000603737 729 ntBASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 AC107871.2-201ENST00000612894 502 ntBASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 CLUHP10-201ENST00000631979 980 ntBASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 CCNT2-202ENST00000295238 4491 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 LCA5-201ENST00000369846 4542 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 PTPRB-208ENST00000550358 6583 ntTSL 2 BASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 AC012618.3-205ENST00000637896 1496 ntBASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 AC117409.1-201ENST00000470499 1310 ntBASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 CD36-214ENST00000447544 2298 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
TRIM35Q9UPQ4 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
TRIM35Q9UPQ4 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC9.51□□□□□ -0.89
TRIM35Q9UPQ4 AOX1-202ENST00000374700 5074 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
TRIM35Q9UPQ4 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
TRIM35Q9UPQ4 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
TRIM35Q9UPQ4 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
TRIM35Q9UPQ4 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
TRIM35Q9UPQ4 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC9.51□□□□□ -0.89
TRIM35Q9UPQ4 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC9.51□□□□□ -0.89
TRIM35Q9UPQ4 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC9.51□□□□□ -0.89
TRIM35Q9UPQ4 NACAP2-201ENST00000318548 624 ntBASIC9.51□□□□□ -0.89
TRIM35Q9UPQ4 OR9K1P-201ENST00000326513 941 ntBASIC9.51□□□□□ -0.89
TRIM35Q9UPQ4 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
TRIM35Q9UPQ4 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
TRIM35Q9UPQ4 RNU6-1263P-201ENST00000384601 106 ntBASIC9.51□□□□□ -0.89
TRIM35Q9UPQ4 SOD1P1-201ENST00000407803 440 ntBASIC9.51□□□□□ -0.89
TRIM35Q9UPQ4 RNU4-14P-201ENST00000410858 122 ntBASIC9.51□□□□□ -0.89
TRIM35Q9UPQ4 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
TRIM35Q9UPQ4 LINC01347-201ENST00000417964 355 ntBASIC9.51□□□□□ -0.89
TRIM35Q9UPQ4 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC9.51□□□□□ -0.89
TRIM35Q9UPQ4 OR51AB1P-201ENST00000429046 620 ntBASIC9.51□□□□□ -0.89
TRIM35Q9UPQ4 AF274573.1-201ENST00000430535 494 ntBASIC9.51□□□□□ -0.89
TRIM35Q9UPQ4 HMGB1P7-201ENST00000450921 612 ntBASIC9.51□□□□□ -0.89
TRIM35Q9UPQ4 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
TRIM35Q9UPQ4 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC9.51□□□□□ -0.89
TRIM35Q9UPQ4 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC9.51□□□□□ -0.89
TRIM35Q9UPQ4 RN7SL88P-201ENST00000480166 299 ntBASIC9.51□□□□□ -0.89
TRIM35Q9UPQ4 GZMAP1-201ENST00000503054 631 ntBASIC9.51□□□□□ -0.89
TRIM35Q9UPQ4 GAPDHP56-201ENST00000506031 988 ntBASIC9.51□□□□□ -0.89
TRIM35Q9UPQ4 RPL7L1P13-201ENST00000511702 739 ntBASIC9.51□□□□□ -0.89
TRIM35Q9UPQ4 RNY4P37-201ENST00000516225 96 ntBASIC9.51□□□□□ -0.89
TRIM35Q9UPQ4 IGHVIII-13-1-201ENST00000517613 291 ntBASIC9.51□□□□□ -0.89
TRIM35Q9UPQ4 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC9.51□□□□□ -0.89
TRIM35Q9UPQ4 RGS4-209ENST00000531057 544 ntTSL 4 BASIC9.51□□□□□ -0.89
TRIM35Q9UPQ4 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC9.51□□□□□ -0.89
TRIM35Q9UPQ4 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC9.51□□□□□ -0.89
TRIM35Q9UPQ4 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
TRIM35Q9UPQ4 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC9.51□□□□□ -0.89
TRIM35Q9UPQ4 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC9.51□□□□□ -0.89
TRIM35Q9UPQ4 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC9.51□□□□□ -0.89
TRIM35Q9UPQ4 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC9.51□□□□□ -0.89
TRIM35Q9UPQ4 AC141273.2-201ENST00000618989 130 ntBASIC9.51□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms