Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 STAT1-212ENST00000540176 4216 ntTSL 5 BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 GRM3-201ENST00000361669 4268 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 NUP58-202ENST00000381736 4332 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 LRTOMT-222ENST00000615940 1895 ntTSL 5 BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 ATG16L1-205ENST00000392020 3213 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 CCL14-201ENST00000614009 3265 ntTSL 2 BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 TCOF1-211ENST00000513346 4646 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 ADAMTSL3-201ENST00000286744 7336 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 CEP70-210ENST00000481834 2037 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 HCAR2-201ENST00000328880 2051 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 MTMR12-202ENST00000280285 4966 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 POLR1B-216ENST00000537335 4961 ntTSL 2 BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 WWP2-213ENST00000568684 3672 ntTSL 2 BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 FOSB-210ENST00000591858 3658 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 MADD-209ENST00000406482 5614 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 GDPD2-202ENST00000453994 2438 ntTSL 2 BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 AC004877.1-201ENST00000608963 4093 ntBASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 MME-212ENST00000493237 2556 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 STAT4-201ENST00000358470 2769 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 N4BP2L1-204ENST00000380139 2994 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 CAPZA2-201ENST00000361183 5182 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 OSBPL9-202ENST00000371714 3352 ntAPPRIS ALT1 TSL 2 BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 INTS3-210ENST00000512605 3442 ntTSL 2 BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 KIF23-207ENST00000559279 3411 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 AC064805.1-202ENST00000569279 3493 ntBASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 MAPT-202ENST00000334239 1107 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 CPSF4L-201ENST00000344935 647 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 PPP2R5C-203ENST00000350249 3845 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 RNU6-170P-201ENST00000362832 104 ntBASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 SNORD113.2-201ENST00000364166 89 ntBASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 DYNLT3P1-201ENST00000378574 347 ntBASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 Y_RNA.415-201ENST00000384012 112 ntBASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 U1.1-201ENST00000384101 164 ntBASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 MIR518C-201ENST00000384822 101 ntBASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 MIR602-201ENST00000384960 98 ntBASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 RNA5SP241-201ENST00000391326 114 ntBASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 KRT18P19-201ENST00000395181 705 ntBASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 RN7SKP61-201ENST00000410642 295 ntBASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 ACTBP7-201ENST00000418351 1124 ntBASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 MGAT3-AS1-201ENST00000432239 498 ntTSL 2 BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 ANKRD54P1-201ENST00000433115 471 ntBASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 IGHV4-31-201ENST00000438142 428 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 AL034399.1-201ENST00000451535 380 ntBASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 RPE-214ENST00000452025 779 ntTSL 3 BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 ACA64.3-201ENST00000459613 127 ntBASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 AL132838.1-201ENST00000469219 542 ntBASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 RRNAD1-204ENST00000476229 1096 ntTSL 5 BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 IGKV2-24-201ENST00000484817 390 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 NME9-208ENST00000484930 825 ntTSL 5 BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 AC021074.1-201ENST00000489462 633 ntBASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 RNU6ATAC12P-201ENST00000516542 115 ntBASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 DIO3OS-209ENST00000556266 401 ntTSL 3 BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 AOC4P-204ENST00000569586 565 ntTSL 4 BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 AKR1B1P7-201ENST00000587229 952 ntBASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 AC087072.1-201ENST00000603727 421 ntBASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 AC123788.2-201ENST00000612290 283 ntBASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 BX510359.7-201ENST00000619819 630 ntBASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 SNORD3D-202ENST00000630092 217 ntBASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 LINC01395-201ENST00000631195 982 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 PCDHGA4-201ENST00000571252 4778 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 AC012313.8-201ENST00000595059 5402 ntBASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 CTSC-201ENST00000227266 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 AL450326.2-201ENST00000421913 1962 ntBASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 ZNF615-215ENST00000618487 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 RNF217-210ENST00000521654 11325 ntAPPRIS P2 TSL 2 BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 AL008638.2-201ENST00000453934 2383 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 FAM71B-201ENST00000302938 2515 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 AHCYL1-201ENST00000359172 2503 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 TCF4-203ENST00000398339 2551 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 NFE2L2-211ENST00000464747 2749 ntTSL 2 BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 WSCD2-207ENST00000549903 3534 ntTSL 5 BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 FBXL19-AS1-201ENST00000563777 3951 ntBASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 PPM1A-202ENST00000325658 4125 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 DHCR24-203ENST00000535035 4153 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 EDAR-201ENST00000258443 4214 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 VDR-206ENST00000549336 4644 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
KRTAP3-3Q9BYR6 PEX5L-208ENST00000467460 9082 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 CA8-201ENST00000317995 3812 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 CUL4A-201ENST00000326335 3705 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 CSPG4P5-201ENST00000558731 3730 ntBASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 SAMD4B-214ENST00000611159 3662 ntTSL 5 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 177.3 ms