Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 MIR6837-201ENST00000620884 64 ntBASIC4.59□□□□□ -1.67
RSPO3Q9BXY4 AL137141.1-201ENST00000624622 4836 ntBASIC4.59□□□□□ -1.67
RSPO3Q9BXY4 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.59□□□□□ -1.67
RSPO3Q9BXY4 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.59□□□□□ -1.67
RSPO3Q9BXY4 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
RSPO3Q9BXY4 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RSPO3Q9BXY4 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.58□□□□□ -1.68
RSPO3Q9BXY4 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.58□□□□□ -1.68
RSPO3Q9BXY4 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
RSPO3Q9BXY4 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.58□□□□□ -1.68
RSPO3Q9BXY4 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.58□□□□□ -1.68
RSPO3Q9BXY4 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
RSPO3Q9BXY4 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RSPO3Q9BXY4 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.58□□□□□ -1.68
RSPO3Q9BXY4 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RSPO3Q9BXY4 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC4.58□□□□□ -1.68
RSPO3Q9BXY4 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RSPO3Q9BXY4 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.58□□□□□ -1.68
RSPO3Q9BXY4 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
RSPO3Q9BXY4 RN7SKP113-201ENST00000363891 295 ntBASIC4.58□□□□□ -1.68
RSPO3Q9BXY4 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RSPO3Q9BXY4 AL357515.1-201ENST00000402967 542 ntBASIC4.58□□□□□ -1.68
RSPO3Q9BXY4 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.58□□□□□ -1.68
RSPO3Q9BXY4 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.58□□□□□ -1.68
RSPO3Q9BXY4 CKS1BP6-201ENST00000424932 240 ntBASIC4.58□□□□□ -1.68
RSPO3Q9BXY4 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.58□□□□□ -1.68
RSPO3Q9BXY4 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.58□□□□□ -1.68
RSPO3Q9BXY4 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.58□□□□□ -1.68
RSPO3Q9BXY4 AC000111.2-201ENST00000448200 210 ntBASIC4.58□□□□□ -1.68
RSPO3Q9BXY4 AL389915.2-201ENST00000454576 441 ntBASIC4.58□□□□□ -1.68
RSPO3Q9BXY4 AC097484.1-201ENST00000471148 389 ntBASIC4.58□□□□□ -1.68
RSPO3Q9BXY4 AC090142.2-201ENST00000483263 416 ntBASIC4.58□□□□□ -1.68
RSPO3Q9BXY4 RN7SL30P-201ENST00000488416 306 ntBASIC4.58□□□□□ -1.68
RSPO3Q9BXY4 AC008953.1-201ENST00000497334 318 ntBASIC4.58□□□□□ -1.68
RSPO3Q9BXY4 AC092593.2-201ENST00000513866 913 ntBASIC4.58□□□□□ -1.68
RSPO3Q9BXY4 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RSPO3Q9BXY4 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.58□□□□□ -1.68
RSPO3Q9BXY4 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.58□□□□□ -1.68
RSPO3Q9BXY4 CYCSP40-201ENST00000575927 294 ntBASIC4.58□□□□□ -1.68
RSPO3Q9BXY4 IMMP1LP1-201ENST00000605170 488 ntBASIC4.58□□□□□ -1.68
RSPO3Q9BXY4 AC126915.2-201ENST00000610957 190 ntBASIC4.58□□□□□ -1.68
RSPO3Q9BXY4 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RSPO3Q9BXY4 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.58□□□□□ -1.68
RSPO3Q9BXY4 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.58□□□□□ -1.68
RSPO3Q9BXY4 AC015871.5-202ENST00000623252 701 ntBASIC4.58□□□□□ -1.68
RSPO3Q9BXY4 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.58□□□□□ -1.68
RSPO3Q9BXY4 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RSPO3Q9BXY4 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
RSPO3Q9BXY4 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
RSPO3Q9BXY4 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RSPO3Q9BXY4 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.58□□□□□ -1.68
RSPO3Q9BXY4 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
RSPO3Q9BXY4 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RSPO3Q9BXY4 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RSPO3Q9BXY4 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RSPO3Q9BXY4 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RSPO3Q9BXY4 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
RSPO3Q9BXY4 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
RSPO3Q9BXY4 SNORA66-201ENST00000384792 133 ntBASIC4.57□□□□□ -1.68
RSPO3Q9BXY4 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RSPO3Q9BXY4 RN7SKP126-201ENST00000411143 300 ntBASIC4.57□□□□□ -1.68
RSPO3Q9BXY4 RGS17P1-201ENST00000423358 553 ntBASIC4.57□□□□□ -1.68
RSPO3Q9BXY4 AL645608.4-201ENST00000423619 154 ntBASIC4.57□□□□□ -1.68
RSPO3Q9BXY4 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.57□□□□□ -1.68
RSPO3Q9BXY4 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RSPO3Q9BXY4 TPT1P1-201ENST00000458495 518 ntBASIC4.57□□□□□ -1.68
RSPO3Q9BXY4 AC135999.1-201ENST00000478962 479 ntBASIC4.57□□□□□ -1.68
RSPO3Q9BXY4 AC090114.3-201ENST00000479267 829 ntBASIC4.57□□□□□ -1.68
RSPO3Q9BXY4 RN7SL727P-201ENST00000482164 296 ntBASIC4.57□□□□□ -1.68
RSPO3Q9BXY4 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
RSPO3Q9BXY4 OR2A3P-201ENST00000493774 953 ntBASIC4.57□□□□□ -1.68
RSPO3Q9BXY4 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.57□□□□□ -1.68
RSPO3Q9BXY4 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.57□□□□□ -1.68
RSPO3Q9BXY4 OR10G5P-201ENST00000532733 358 ntBASIC4.57□□□□□ -1.68
RSPO3Q9BXY4 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.57□□□□□ -1.68
RSPO3Q9BXY4 MIR1269B-201ENST00000580405 75 ntBASIC4.57□□□□□ -1.68
RSPO3Q9BXY4 AC099494.2-201ENST00000623371 978 ntBASIC4.57□□□□□ -1.68
RSPO3Q9BXY4 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.57□□□□□ -1.68
RSPO3Q9BXY4 PABPC1P6-201ENST00000445594 1829 ntBASIC4.57□□□□□ -1.68
RSPO3Q9BXY4 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.57□□□□□ -1.68
RSPO3Q9BXY4 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
RSPO3Q9BXY4 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
RSPO3Q9BXY4 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
RSPO3Q9BXY4 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RSPO3Q9BXY4 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RSPO3Q9BXY4 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RSPO3Q9BXY4 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.57□□□□□ -1.68
RSPO3Q9BXY4 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RSPO3Q9BXY4 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RSPO3Q9BXY4 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RSPO3Q9BXY4 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
RSPO3Q9BXY4 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
RSPO3Q9BXY4 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
RSPO3Q9BXY4 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RSPO3Q9BXY4 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.56□□□□□ -1.68
RSPO3Q9BXY4 SNURFL-201ENST00000309296 343 ntBASIC4.56□□□□□ -1.68
RSPO3Q9BXY4 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
RSPO3Q9BXY4 NPM1P40-201ENST00000412758 733 ntBASIC4.56□□□□□ -1.68
RSPO3Q9BXY4 EIF4HP2-201ENST00000424380 563 ntBASIC4.56□□□□□ -1.68
RSPO3Q9BXY4 AC006455.6-201ENST00000426192 893 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms