Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 AL596244.1-201ENST00000567068 3779 ntBASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 AC007342.7-201ENST00000624610 2337 ntBASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 PPIAP24-201ENST00000328558 471 ntBASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 RNU6-353P-201ENST00000364266 108 ntBASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 Y_RNA.256-201ENST00000364594 104 ntBASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 SUGT1P2-201ENST00000379452 992 ntBASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 U3.52-201ENST00000384034 216 ntBASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 RPS27AP11-201ENST00000402798 447 ntBASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 MIR1277-201ENST00000408536 78 ntBASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 OR5AW1P-201ENST00000426334 1006 ntBASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 AC091390.2-201ENST00000432573 374 ntBASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 AC128677.1-201ENST00000436016 442 ntBASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 TMX2P1-201ENST00000436507 708 ntBASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 GAPDHP33-201ENST00000443168 1013 ntBASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 AC234771.2-201ENST00000445718 597 ntBASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 YRDCP3-201ENST00000456507 480 ntBASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 RNU7-140P-201ENST00000459546 60 ntBASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 KLF3P2-201ENST00000465138 268 ntBASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 AC005165.2-201ENST00000466070 380 ntBASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 AC117395.1-201ENST00000487390 403 ntBASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 AC006499.5-201ENST00000505037 514 ntBASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 AC093870.1-201ENST00000506837 213 ntBASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 AP000662.1-201ENST00000530952 487 ntBASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 AC019257.2-201ENST00000605539 497 ntBASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 AL513218.1-201ENST00000606527 391 ntBASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 AL354760.1-201ENST00000608357 643 ntBASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 AC092681.3-201ENST00000609463 678 ntBASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 MIR6889-201ENST00000613185 59 ntBASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 MIR7844-201ENST00000616161 122 ntBASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 AP000577.1-201ENST00000624366 878 ntBASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
SSBP3Q9BWW4 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 WBP11P1-201ENST00000562560 1931 ntBASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 AC073055.1-201ENST00000456901 1621 ntBASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms