Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.38□□□□□ -1.71
AP3S1Q92572 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
AP3S1Q92572 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
AP3S1Q92572 RNA5SP273-201ENST00000362484 113 ntBASIC4.38□□□□□ -1.71
AP3S1Q92572 RNA5SP28-201ENST00000363841 119 ntBASIC4.38□□□□□ -1.71
AP3S1Q92572 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
AP3S1Q92572 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
AP3S1Q92572 LRRC37BP1-201ENST00000398851 714 ntBASIC4.38□□□□□ -1.71
AP3S1Q92572 AL133388.1-201ENST00000404509 287 ntBASIC4.38□□□□□ -1.71
AP3S1Q92572 AL139039.2-201ENST00000407436 479 ntBASIC4.38□□□□□ -1.71
AP3S1Q92572 EIF4EP1-201ENST00000422311 642 ntBASIC4.38□□□□□ -1.71
AP3S1Q92572 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC4.38□□□□□ -1.71
AP3S1Q92572 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.38□□□□□ -1.71
AP3S1Q92572 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
AP3S1Q92572 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.38□□□□□ -1.71
AP3S1Q92572 AC073052.1-201ENST00000440417 714 ntBASIC4.38□□□□□ -1.71
AP3S1Q92572 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.38□□□□□ -1.71
AP3S1Q92572 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.38□□□□□ -1.71
AP3S1Q92572 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.38□□□□□ -1.71
AP3S1Q92572 AL691482.1-201ENST00000453255 87 ntBASIC4.38□□□□□ -1.71
AP3S1Q92572 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.38□□□□□ -1.71
AP3S1Q92572 OR2A3P-201ENST00000493774 953 ntBASIC4.38□□□□□ -1.71
AP3S1Q92572 CBX1-205ENST00000495350 550 ntTSL 2 BASIC4.38□□□□□ -1.71
AP3S1Q92572 LSM3P4-201ENST00000502948 309 ntBASIC4.38□□□□□ -1.71
AP3S1Q92572 GUSBP9-201ENST00000510138 584 ntBASIC4.38□□□□□ -1.71
AP3S1Q92572 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.38□□□□□ -1.71
AP3S1Q92572 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.38□□□□□ -1.71
AP3S1Q92572 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC4.38□□□□□ -1.71
AP3S1Q92572 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC4.38□□□□□ -1.71
AP3S1Q92572 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC4.38□□□□□ -1.71
AP3S1Q92572 HMGB1P40-201ENST00000525121 540 ntBASIC4.38□□□□□ -1.71
AP3S1Q92572 CYCSP28-201ENST00000534284 321 ntBASIC4.38□□□□□ -1.71
AP3S1Q92572 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
AP3S1Q92572 PDCD5P1-201ENST00000543528 309 ntBASIC4.38□□□□□ -1.71
AP3S1Q92572 AC107958.1-201ENST00000556576 290 ntBASIC4.38□□□□□ -1.71
AP3S1Q92572 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.38□□□□□ -1.71
AP3S1Q92572 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC4.38□□□□□ -1.71
AP3S1Q92572 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.38□□□□□ -1.71
AP3S1Q92572 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.38□□□□□ -1.71
AP3S1Q92572 AC091046.3-201ENST00000631455 1574 ntBASIC4.38□□□□□ -1.71
AP3S1Q92572 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
AP3S1Q92572 EOGT-210ENST00000615922 1931 ntBASIC4.38□□□□□ -1.71
AP3S1Q92572 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
AP3S1Q92572 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.38□□□□□ -1.71
AP3S1Q92572 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.38□□□□□ -1.71
AP3S1Q92572 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
AP3S1Q92572 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
AP3S1Q92572 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
AP3S1Q92572 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
AP3S1Q92572 AC009643.2-201ENST00000603543 1448 ntBASIC4.38□□□□□ -1.71
AP3S1Q92572 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC4.38□□□□□ -1.71
AP3S1Q92572 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
AP3S1Q92572 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
AP3S1Q92572 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
AP3S1Q92572 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
AP3S1Q92572 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.37□□□□□ -1.71
AP3S1Q92572 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
AP3S1Q92572 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.37□□□□□ -1.71
AP3S1Q92572 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.37□□□□□ -1.71
AP3S1Q92572 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
AP3S1Q92572 RNA5SP477-201ENST00000362639 119 ntBASIC4.37□□□□□ -1.71
AP3S1Q92572 RNU1-20P-201ENST00000363314 162 ntBASIC4.37□□□□□ -1.71
AP3S1Q92572 RNA5SP394-201ENST00000364216 119 ntBASIC4.37□□□□□ -1.71
AP3S1Q92572 SNORA66-201ENST00000384792 133 ntBASIC4.37□□□□□ -1.71
AP3S1Q92572 RPS24P12-201ENST00000402084 394 ntBASIC4.37□□□□□ -1.71
AP3S1Q92572 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.37□□□□□ -1.71
AP3S1Q92572 RN7SL799P-201ENST00000475891 298 ntBASIC4.37□□□□□ -1.71
AP3S1Q92572 AL136038.1-201ENST00000497246 351 ntBASIC4.37□□□□□ -1.71
AP3S1Q92572 AC091874.2-201ENST00000505889 720 ntBASIC4.37□□□□□ -1.71
AP3S1Q92572 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.37□□□□□ -1.71
AP3S1Q92572 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC4.37□□□□□ -1.71
AP3S1Q92572 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC4.37□□□□□ -1.71
AP3S1Q92572 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC4.37□□□□□ -1.71
AP3S1Q92572 DYNLL1P4-201ENST00000549314 266 ntBASIC4.37□□□□□ -1.71
AP3S1Q92572 SULT1C2P2-201ENST00000562517 294 ntBASIC4.37□□□□□ -1.71
AP3S1Q92572 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.37□□□□□ -1.71
AP3S1Q92572 MIR4502-201ENST00000580432 81 ntBASIC4.37□□□□□ -1.71
AP3S1Q92572 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC4.37□□□□□ -1.71
AP3S1Q92572 AP005432.2-201ENST00000608162 586 ntBASIC4.37□□□□□ -1.71
AP3S1Q92572 AC012414.7-202ENST00000622705 1090 ntBASIC4.37□□□□□ -1.71
AP3S1Q92572 AC005086.4-201ENST00000623065 213 ntBASIC4.37□□□□□ -1.71
AP3S1Q92572 AC025262.3-201ENST00000623666 360 ntBASIC4.37□□□□□ -1.71
AP3S1Q92572 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.37□□□□□ -1.71
AP3S1Q92572 AC007603.3-201ENST00000636915 979 ntBASIC4.37□□□□□ -1.71
AP3S1Q92572 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
AP3S1Q92572 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
AP3S1Q92572 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
AP3S1Q92572 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
AP3S1Q92572 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
AP3S1Q92572 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
AP3S1Q92572 AC104966.1-201ENST00000467010 1464 ntBASIC4.37□□□□□ -1.71
AP3S1Q92572 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
AP3S1Q92572 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
AP3S1Q92572 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
AP3S1Q92572 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.36□□□□□ -1.71
AP3S1Q92572 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
AP3S1Q92572 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
AP3S1Q92572 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
AP3S1Q92572 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.36□□□□□ -1.71
AP3S1Q92572 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms