Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 ENPP7P9-201ENST00000514456 627 ntBASIC4.23□□□□□ -1.73
RTN4IP1Q8WWV3 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.23□□□□□ -1.73
RTN4IP1Q8WWV3 HNRNPRP2-201ENST00000528421 743 ntBASIC4.23□□□□□ -1.73
RTN4IP1Q8WWV3 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.23□□□□□ -1.73
RTN4IP1Q8WWV3 ADAM3B-201ENST00000569937 840 ntBASIC4.23□□□□□ -1.73
RTN4IP1Q8WWV3 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.23□□□□□ -1.73
RTN4IP1Q8WWV3 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.23□□□□□ -1.73
RTN4IP1Q8WWV3 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.23□□□□□ -1.73
RTN4IP1Q8WWV3 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
RTN4IP1Q8WWV3 AC135068.12-201ENST00000637370 931 ntBASIC4.23□□□□□ -1.73
RTN4IP1Q8WWV3 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RTN4IP1Q8WWV3 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RTN4IP1Q8WWV3 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
RTN4IP1Q8WWV3 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.23□□□□□ -1.73
RTN4IP1Q8WWV3 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RTN4IP1Q8WWV3 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
RTN4IP1Q8WWV3 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.23□□□□□ -1.73
RTN4IP1Q8WWV3 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RTN4IP1Q8WWV3 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.23□□□□□ -1.73
RTN4IP1Q8WWV3 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 DDX18P6-201ENST00000450119 1997 ntBASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 U3.3-201ENST00000362986 216 ntBASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 RPL35AP24-201ENST00000413846 330 ntBASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 SLC35E1P1-201ENST00000419313 864 ntBASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 EIF4A1P1-201ENST00000420241 934 ntBASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 AC012519.1-201ENST00000424588 610 ntBASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 RPS26P4-201ENST00000431743 355 ntBASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 AC020779.1-201ENST00000478757 796 ntBASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 AC090686.1-201ENST00000481577 749 ntBASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 RN7SL441P-201ENST00000492388 296 ntBASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 PGAM1P13-201ENST00000507497 754 ntBASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 AL671862.1-201ENST00000515851 349 ntBASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 AL049830.4-201ENST00000555149 351 ntBASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 AC116553.2-201ENST00000564203 463 ntBASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 AL390726.5-202ENST00000564800 256 ntBASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 OR8G7P-201ENST00000616658 848 ntBASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 AC090527.3-201ENST00000619041 548 ntBASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.22□□□□□ -1.73
RTN4IP1Q8WWV3 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
RTN4IP1Q8WWV3 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
RTN4IP1Q8WWV3 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 NUDT19P3-201ENST00000404698 555 ntBASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 AL391361.1-201ENST00000405580 489 ntBASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 TMBIM7P-201ENST00000418074 855 ntBASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 RPS4XP16-201ENST00000427198 791 ntBASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 NAP1L4P3-201ENST00000432820 1147 ntBASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 PPIAP20-201ENST00000449839 135 ntBASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 RPS4XP1-201ENST00000482189 787 ntBASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 RPS21P4-201ENST00000487122 248 ntBASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 RN7SL346P-201ENST00000491561 294 ntBASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 AC024558.1-201ENST00000505008 528 ntBASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms