Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC7.55□□□□□ -1.2
VPS8Q8N3P4 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC7.55□□□□□ -1.2
VPS8Q8N3P4 SNORA74C-1-201ENST00000580726 201 ntBASIC7.55□□□□□ -1.2
VPS8Q8N3P4 AC008833.1-201ENST00000611633 691 ntBASIC7.55□□□□□ -1.2
VPS8Q8N3P4 MIR6853-201ENST00000619642 74 ntBASIC7.55□□□□□ -1.2
VPS8Q8N3P4 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
VPS8Q8N3P4 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
VPS8Q8N3P4 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
VPS8Q8N3P4 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC7.55□□□□□ -1.2
VPS8Q8N3P4 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
VPS8Q8N3P4 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
VPS8Q8N3P4 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
VPS8Q8N3P4 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC7.54□□□□□ -1.2
VPS8Q8N3P4 RPL26P29-201ENST00000415623 438 ntBASIC7.54□□□□□ -1.2
VPS8Q8N3P4 TMBIM7P-201ENST00000418074 855 ntBASIC7.54□□□□□ -1.2
VPS8Q8N3P4 RGS17P1-201ENST00000423358 553 ntBASIC7.54□□□□□ -1.2
VPS8Q8N3P4 CKS1BP6-201ENST00000424932 240 ntBASIC7.54□□□□□ -1.2
VPS8Q8N3P4 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC7.54□□□□□ -1.2
VPS8Q8N3P4 AL138878.2-201ENST00000440581 1241 ntBASIC7.54□□□□□ -1.2
VPS8Q8N3P4 RHEBP2-201ENST00000450289 600 ntBASIC7.54□□□□□ -1.2
VPS8Q8N3P4 EEF1A1P25-201ENST00000495704 1267 ntBASIC7.54□□□□□ -1.2
VPS8Q8N3P4 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC7.54□□□□□ -1.2
VPS8Q8N3P4 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC7.54□□□□□ -1.2
VPS8Q8N3P4 RNU1-6P-201ENST00000516290 144 ntBASIC7.54□□□□□ -1.2
VPS8Q8N3P4 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
VPS8Q8N3P4 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC7.54□□□□□ -1.2
VPS8Q8N3P4 BNIP3P1-201ENST00000547295 580 ntBASIC7.54□□□□□ -1.2
VPS8Q8N3P4 AC133555.2-201ENST00000550213 292 ntBASIC7.54□□□□□ -1.2
VPS8Q8N3P4 RPL27-207ENST00000590864 569 ntTSL 2 BASIC7.54□□□□□ -1.2
VPS8Q8N3P4 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
VPS8Q8N3P4 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC7.54□□□□□ -1.2
VPS8Q8N3P4 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
VPS8Q8N3P4 AC008549.2-201ENST00000333482 706 ntBASIC7.53□□□□□ -1.2
VPS8Q8N3P4 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
VPS8Q8N3P4 RPL37P18-201ENST00000411602 243 ntBASIC7.53□□□□□ -1.2
VPS8Q8N3P4 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC7.53□□□□□ -1.2
VPS8Q8N3P4 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC7.53□□□□□ -1.2
VPS8Q8N3P4 AC093166.2-201ENST00000455969 1017 ntBASIC7.53□□□□□ -1.2
VPS8Q8N3P4 RPS29P33-201ENST00000456717 146 ntBASIC7.53□□□□□ -1.2
VPS8Q8N3P4 RNA5SP228-201ENST00000516232 133 ntBASIC7.53□□□□□ -1.2
VPS8Q8N3P4 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC7.53□□□□□ -1.2
VPS8Q8N3P4 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC7.53□□□□□ -1.2
VPS8Q8N3P4 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
VPS8Q8N3P4 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC7.53□□□□□ -1.2
VPS8Q8N3P4 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
VPS8Q8N3P4 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
VPS8Q8N3P4 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC7.53□□□□□ -1.2
VPS8Q8N3P4 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
VPS8Q8N3P4 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC7.53□□□□□ -1.2
VPS8Q8N3P4 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC7.53□□□□□ -1.2
VPS8Q8N3P4 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
VPS8Q8N3P4 AL034370.1-201ENST00000397254 1590 ntBASIC7.53□□□□□ -1.2
VPS8Q8N3P4 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
VPS8Q8N3P4 MIR192-201ENST00000384915 110 ntBASIC7.52□□□□□ -1.2
VPS8Q8N3P4 RNU1-82P-201ENST00000390851 165 ntBASIC7.52□□□□□ -1.2
VPS8Q8N3P4 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC7.52□□□□□ -1.2
VPS8Q8N3P4 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC7.52□□□□□ -1.2
VPS8Q8N3P4 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC7.52□□□□□ -1.2
VPS8Q8N3P4 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC7.52□□□□□ -1.2
VPS8Q8N3P4 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC7.52□□□□□ -1.2
VPS8Q8N3P4 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC7.52□□□□□ -1.2
VPS8Q8N3P4 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC7.52□□□□□ -1.2
VPS8Q8N3P4 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC7.52□□□□□ -1.2
VPS8Q8N3P4 CYCSP40-201ENST00000575927 294 ntBASIC7.52□□□□□ -1.2
VPS8Q8N3P4 AC073091.2-201ENST00000603205 907 ntBASIC7.52□□□□□ -1.2
VPS8Q8N3P4 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC7.52□□□□□ -1.2
VPS8Q8N3P4 AL449283.1-201ENST00000602631 3403 ntBASIC7.52□□□□□ -1.2
VPS8Q8N3P4 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
VPS8Q8N3P4 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
VPS8Q8N3P4 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
VPS8Q8N3P4 OR9K1P-202ENST00000641111 3217 ntBASIC7.52□□□□□ -1.21
VPS8Q8N3P4 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC7.52□□□□□ -1.21
VPS8Q8N3P4 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
VPS8Q8N3P4 RNU6-398P-201ENST00000384143 109 ntBASIC7.52□□□□□ -1.21
VPS8Q8N3P4 NPM1P40-201ENST00000412758 733 ntBASIC7.52□□□□□ -1.21
VPS8Q8N3P4 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
VPS8Q8N3P4 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC7.52□□□□□ -1.21
VPS8Q8N3P4 AC016831.4-201ENST00000438302 307 ntBASIC7.52□□□□□ -1.21
VPS8Q8N3P4 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC7.52□□□□□ -1.21
VPS8Q8N3P4 AC096741.1-201ENST00000472250 846 ntBASIC7.52□□□□□ -1.21
VPS8Q8N3P4 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC7.52□□□□□ -1.21
VPS8Q8N3P4 AP006289.1-201ENST00000538089 277 ntBASIC7.52□□□□□ -1.21
VPS8Q8N3P4 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
VPS8Q8N3P4 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC7.52□□□□□ -1.21
VPS8Q8N3P4 AC010480.1-201ENST00000624823 684 ntBASIC7.52□□□□□ -1.21
VPS8Q8N3P4 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
VPS8Q8N3P4 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
VPS8Q8N3P4 CCAT2-201ENST00000630920 1752 ntBASIC7.51□□□□□ -1.21
VPS8Q8N3P4 AL132640.2-201ENST00000559968 1698 ntBASIC7.51□□□□□ -1.21
VPS8Q8N3P4 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
VPS8Q8N3P4 AL121950.1-201ENST00000624993 2077 ntBASIC7.51□□□□□ -1.21
VPS8Q8N3P4 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
VPS8Q8N3P4 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
VPS8Q8N3P4 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
VPS8Q8N3P4 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
VPS8Q8N3P4 SNORA70F-201ENST00000384142 135 ntBASIC7.51□□□□□ -1.21
VPS8Q8N3P4 AL049697.2-201ENST00000403708 294 ntBASIC7.51□□□□□ -1.21
VPS8Q8N3P4 RPS21P8-201ENST00000413365 247 ntBASIC7.51□□□□□ -1.21
VPS8Q8N3P4 ATG4AP1-201ENST00000416893 538 ntBASIC7.51□□□□□ -1.21
VPS8Q8N3P4 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC7.51□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms