Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 FXYD6P1-201ENST00000604857 285 ntBASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 AP004247.4-201ENST00000608484 942 ntBASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 AL161734.1-201ENST00000609720 557 ntBASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 AC078899.5-201ENST00000612475 178 ntBASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 AC018793.5-201ENST00000640302 585 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 RAD17P2-201ENST00000451754 1977 ntBASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 ZNF33BP1-201ENST00000452497 1834 ntBASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 HSPA8P11-201ENST00000508840 1898 ntBASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 NCOA4P3-201ENST00000513203 1877 ntBASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 AC093909.4-201ENST00000514297 1991 ntTSL 5 BASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 RNU6-845P-201ENST00000362578 103 ntBASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 MIR137-201ENST00000385223 102 ntBASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 TRBV5-3-201ENST00000390362 343 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 YBX1P8-201ENST00000421881 943 ntBASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 EIF1P3-201ENST00000423841 334 ntBASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 USP9YP9-201ENST00000429406 715 ntBASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 MTCO3P21-201ENST00000430791 643 ntBASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 AC016734.1-201ENST00000436998 654 ntBASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 RPS10P18-201ENST00000442662 495 ntBASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 HMGN1P36-201ENST00000446623 298 ntBASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 AC002075.1-201ENST00000457396 676 ntBASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 RNU6-420P-201ENST00000458780 107 ntBASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 AC098583.2-201ENST00000504151 372 ntBASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 AC111198.1-201ENST00000505575 606 ntTSL 4 BASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 AC025180.1-201ENST00000505701 595 ntTSL 4 BASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 OR52K3P-201ENST00000531655 943 ntBASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 NANOGNBP2-201ENST00000544753 553 ntBASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 PFDN5-211ENST00000550846 392 ntTSL 2 BASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 PFDN5-214ENST00000551018 847 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 SRMP2-201ENST00000553832 916 ntBASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 DNM1P33-201ENST00000565222 270 ntBASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 MIR4262-201ENST00000578394 54 ntBASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 RN7SL473P-201ENST00000580341 299 ntBASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 RPS11-203ENST00000596873 583 ntTSL 2 BASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 CR392039.3-201ENST00000623236 227 ntTSL 5 BASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 LINC01206-228ENST00000628718 871 ntTSL 5 BASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 LINC02034-201ENST00000635368 760 ntTSL 5 BASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 MIR3120-201ENST00000636555 81 ntBASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 AC024560.2-201ENST00000507981 1497 ntBASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
DEPDC4Q8N2C3 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.28
DEPDC4Q8N2C3 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC7.02□□□□□ -1.28
DEPDC4Q8N2C3 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 USP9YP4-201ENST00000424401 1745 ntBASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 OCM-201ENST00000242104 695 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 OR2T10-201ENST00000330500 1049 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 KCNIP2-202ENST00000343195 663 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 Y_RNA.166-201ENST00000363730 102 ntBASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 188.7 ms