Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC50Q8IVM0 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CCDC50Q8IVM0 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CCDC50Q8IVM0 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC50Q8IVM0 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC50Q8IVM0 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC50Q8IVM0 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC50Q8IVM0 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CCDC50Q8IVM0 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC50Q8IVM0 MIR600-201ENST00000385007 98 ntBASIC5.35□□□□□ -1.55
CCDC50Q8IVM0 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CCDC50Q8IVM0 SNORA17A-201ENST00000391185 133 ntBASIC5.35□□□□□ -1.55
CCDC50Q8IVM0 AC009804.1-201ENST00000400949 179 ntBASIC5.35□□□□□ -1.55
CCDC50Q8IVM0 RN7SKP293-201ENST00000411389 296 ntBASIC5.35□□□□□ -1.55
CCDC50Q8IVM0 COX6CP13-201ENST00000428703 226 ntBASIC5.35□□□□□ -1.55
CCDC50Q8IVM0 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC50Q8IVM0 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC50Q8IVM0 RPS26P41-201ENST00000450370 284 ntBASIC5.35□□□□□ -1.55
CCDC50Q8IVM0 Z92846.1-201ENST00000456203 268 ntBASIC5.35□□□□□ -1.55
CCDC50Q8IVM0 AL445433.1-201ENST00000457507 257 ntBASIC5.35□□□□□ -1.55
CCDC50Q8IVM0 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC50Q8IVM0 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC50Q8IVM0 AC005412.2-201ENST00000492004 341 ntBASIC5.35□□□□□ -1.55
CCDC50Q8IVM0 AC104109.1-201ENST00000498563 436 ntBASIC5.35□□□□□ -1.55
CCDC50Q8IVM0 RPS4XP20-201ENST00000505751 772 ntBASIC5.35□□□□□ -1.55
CCDC50Q8IVM0 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC50Q8IVM0 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC50Q8IVM0 RNA5SP362-201ENST00000516048 118 ntBASIC5.35□□□□□ -1.55
CCDC50Q8IVM0 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC50Q8IVM0 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC50Q8IVM0 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC50Q8IVM0 AC069307.1-201ENST00000602820 447 ntBASIC5.35□□□□□ -1.55
CCDC50Q8IVM0 RNF138P2-201ENST00000603490 592 ntBASIC5.35□□□□□ -1.55
CCDC50Q8IVM0 AC087468.1-201ENST00000604365 630 ntBASIC5.35□□□□□ -1.55
CCDC50Q8IVM0 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC50Q8IVM0 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC50Q8IVM0 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC50Q8IVM0 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.35□□□□□ -1.55
CCDC50Q8IVM0 SNORA17.5-201ENST00000630429 132 ntBASIC5.35□□□□□ -1.55
CCDC50Q8IVM0 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC50Q8IVM0 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC50Q8IVM0 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CCDC50Q8IVM0 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CCDC50Q8IVM0 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
CCDC50Q8IVM0 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC50Q8IVM0 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.35□□□□□ -1.55
CCDC50Q8IVM0 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC50Q8IVM0 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.34□□□□□ -1.55
CCDC50Q8IVM0 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC50Q8IVM0 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
CCDC50Q8IVM0 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC50Q8IVM0 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
CCDC50Q8IVM0 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.34□□□□□ -1.55
CCDC50Q8IVM0 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC50Q8IVM0 RN7SKP247-201ENST00000411094 308 ntBASIC5.34□□□□□ -1.55
CCDC50Q8IVM0 CDY17P-201ENST00000414121 1282 ntBASIC5.34□□□□□ -1.55
CCDC50Q8IVM0 CYCSP10-201ENST00000417973 294 ntBASIC5.34□□□□□ -1.55
CCDC50Q8IVM0 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC50Q8IVM0 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.34□□□□□ -1.55
CCDC50Q8IVM0 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.34□□□□□ -1.55
CCDC50Q8IVM0 AC079807.1-201ENST00000429993 481 ntBASIC5.34□□□□□ -1.55
CCDC50Q8IVM0 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC50Q8IVM0 MRPL35P2-201ENST00000448009 511 ntBASIC5.34□□□□□ -1.55
CCDC50Q8IVM0 AC144530.1-201ENST00000452862 555 ntBASIC5.34□□□□□ -1.55
CCDC50Q8IVM0 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC50Q8IVM0 AL645937.3-201ENST00000453647 936 ntBASIC5.34□□□□□ -1.55
CCDC50Q8IVM0 AC023141.9-201ENST00000458734 412 ntBASIC5.34□□□□□ -1.55
CCDC50Q8IVM0 RPL7P6-201ENST00000480903 738 ntBASIC5.34□□□□□ -1.55
CCDC50Q8IVM0 AC015864.1-201ENST00000496512 544 ntBASIC5.34□□□□□ -1.55
CCDC50Q8IVM0 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC50Q8IVM0 UGT2A3P7-201ENST00000510485 734 ntBASIC5.34□□□□□ -1.55
CCDC50Q8IVM0 AC105031.1-201ENST00000518550 476 ntBASIC5.34□□□□□ -1.55
CCDC50Q8IVM0 AC134698.5-201ENST00000519444 336 ntBASIC5.34□□□□□ -1.55
CCDC50Q8IVM0 KCTD9P6-201ENST00000522306 950 ntBASIC5.34□□□□□ -1.55
CCDC50Q8IVM0 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.34□□□□□ -1.55
CCDC50Q8IVM0 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC50Q8IVM0 AC024940.3-201ENST00000538551 316 ntBASIC5.34□□□□□ -1.55
CCDC50Q8IVM0 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.34□□□□□ -1.55
CCDC50Q8IVM0 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC50Q8IVM0 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.34□□□□□ -1.55
CCDC50Q8IVM0 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.34□□□□□ -1.55
CCDC50Q8IVM0 AP005131.7-201ENST00000610087 611 ntBASIC5.34□□□□□ -1.55
CCDC50Q8IVM0 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC50Q8IVM0 AC007204.2-201ENST00000615022 616 ntBASIC5.34□□□□□ -1.55
CCDC50Q8IVM0 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.34□□□□□ -1.55
CCDC50Q8IVM0 AC136428.4-201ENST00000634254 1155 ntBASIC5.34□□□□□ -1.55
CCDC50Q8IVM0 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC50Q8IVM0 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC50Q8IVM0 DDX18P6-201ENST00000450119 1997 ntBASIC5.34□□□□□ -1.55
CCDC50Q8IVM0 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.34□□□□□ -1.55
CCDC50Q8IVM0 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC50Q8IVM0 MIPEPP2-201ENST00000422560 1819 ntBASIC5.34□□□□□ -1.55
CCDC50Q8IVM0 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.34□□□□□ -1.55
CCDC50Q8IVM0 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
CCDC50Q8IVM0 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CCDC50Q8IVM0 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC50Q8IVM0 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC50Q8IVM0 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms