Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC2.93□□□□□ -1.94
HSPG2P98160 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
HSPG2P98160 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HSPG2P98160 LRRC37BP1-201ENST00000398851 714 ntBASIC2.93□□□□□ -1.94
HSPG2P98160 PVALB-202ENST00000404171 422 ntTSL 2 BASIC2.93□□□□□ -1.94
HSPG2P98160 CRYBB2P1-203ENST00000415709 538 ntBASIC2.93□□□□□ -1.94
HSPG2P98160 AC092651.1-201ENST00000426110 312 ntBASIC2.93□□□□□ -1.94
HSPG2P98160 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC2.93□□□□□ -1.94
HSPG2P98160 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC2.93□□□□□ -1.94
HSPG2P98160 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC2.93□□□□□ -1.94
HSPG2P98160 RPL7AP61-201ENST00000443410 636 ntBASIC2.93□□□□□ -1.94
HSPG2P98160 RPS3AP12-201ENST00000443616 753 ntBASIC2.93□□□□□ -1.94
HSPG2P98160 RPL7P41-201ENST00000485823 957 ntBASIC2.93□□□□□ -1.94
HSPG2P98160 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.93□□□□□ -1.94
HSPG2P98160 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC2.93□□□□□ -1.94
HSPG2P98160 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
HSPG2P98160 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC2.93□□□□□ -1.94
HSPG2P98160 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC2.93□□□□□ -1.94
HSPG2P98160 AL121772.2-201ENST00000614331 297 ntBASIC2.93□□□□□ -1.94
HSPG2P98160 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
HSPG2P98160 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC2.93□□□□□ -1.94
HSPG2P98160 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
HSPG2P98160 ARHGAP19-202ENST00000358531 5463 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
HSPG2P98160 DROSHA-201ENST00000344624 5102 ntAPPRIS P4 TSL 5 BASIC2.93□□□□□ -1.94
HSPG2P98160 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
HSPG2P98160 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC2.93□□□□□ -1.94
HSPG2P98160 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
HSPG2P98160 AC004817.4-201ENST00000602396 3625 ntBASIC2.93□□□□□ -1.94
HSPG2P98160 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
HSPG2P98160 RNA5SP124-201ENST00000362739 110 ntBASIC2.93□□□□□ -1.94
HSPG2P98160 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
HSPG2P98160 SNORA70.9-201ENST00000384370 135 ntBASIC2.93□□□□□ -1.94
HSPG2P98160 AL356276.2-201ENST00000435919 558 ntBASIC2.93□□□□□ -1.94
HSPG2P98160 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC2.93□□□□□ -1.94
HSPG2P98160 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HSPG2P98160 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.93□□□□□ -1.94
HSPG2P98160 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.93□□□□□ -1.94
HSPG2P98160 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC2.93□□□□□ -1.94
HSPG2P98160 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
HSPG2P98160 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
HSPG2P98160 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
HSPG2P98160 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
HSPG2P98160 SMG1P6-201ENST00000532337 2930 ntBASIC2.93□□□□□ -1.94
HSPG2P98160 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
HSPG2P98160 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC2.93□□□□□ -1.94
HSPG2P98160 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC2.93□□□□□ -1.94
HSPG2P98160 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
HSPG2P98160 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HSPG2P98160 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.93□□□□□ -1.94
HSPG2P98160 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC2.93□□□□□ -1.94
HSPG2P98160 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.93□□□□□ -1.94
HSPG2P98160 RPL19P16-201ENST00000433839 588 ntBASIC2.93□□□□□ -1.94
HSPG2P98160 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HSPG2P98160 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC2.93□□□□□ -1.94
HSPG2P98160 GMPSP1-201ENST00000514075 579 ntBASIC2.93□□□□□ -1.94
HSPG2P98160 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC2.93□□□□□ -1.94
HSPG2P98160 AL162574.1-201ENST00000615702 950 ntBASIC2.93□□□□□ -1.94
HSPG2P98160 OR14L1P-202ENST00000641545 3009 ntBASIC2.93□□□□□ -1.94
HSPG2P98160 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HSPG2P98160 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC2.93□□□□□ -1.94
HSPG2P98160 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC2.93□□□□□ -1.94
HSPG2P98160 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
HSPG2P98160 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
HSPG2P98160 SHROOM4-203ENST00000460112 8919 ntTSL 5 BASIC2.92□□□□□ -1.94
HSPG2P98160 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HSPG2P98160 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HSPG2P98160 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HSPG2P98160 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
HSPG2P98160 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC2.92□□□□□ -1.94
HSPG2P98160 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
HSPG2P98160 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC2.92□□□□□ -1.94
HSPG2P98160 TENM2-203ENST00000518659 8550 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
HSPG2P98160 RAD54L2-201ENST00000409535 9776 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
HSPG2P98160 AC007068.1-201ENST00000396690 844 ntBASIC2.92□□□□□ -1.94
HSPG2P98160 VN2R3P-201ENST00000422626 1412 ntBASIC2.92□□□□□ -1.94
HSPG2P98160 AC007688.1-201ENST00000475592 759 ntBASIC2.92□□□□□ -1.94
HSPG2P98160 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC2.92□□□□□ -1.94
HSPG2P98160 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC2.92□□□□□ -1.94
HSPG2P98160 AC060780.2-201ENST00000589047 198 ntBASIC2.92□□□□□ -1.94
HSPG2P98160 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC2.92□□□□□ -1.94
HSPG2P98160 AC010424.2-201ENST00000607594 443 ntBASIC2.92□□□□□ -1.94
HSPG2P98160 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.92□□□□□ -1.94
HSPG2P98160 MIR8059-201ENST00000620427 81 ntBASIC2.92□□□□□ -1.94
HSPG2P98160 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
HSPG2P98160 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC2.92□□□□□ -1.94
HSPG2P98160 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC2.92□□□□□ -1.94
HSPG2P98160 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HSPG2P98160 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
HSPG2P98160 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC2.92□□□□□ -1.94
HSPG2P98160 ATXN1-201ENST00000244769 10602 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
HSPG2P98160 AC008758.3-201ENST00000507003 1829 ntBASIC2.92□□□□□ -1.94
HSPG2P98160 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HSPG2P98160 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
HSPG2P98160 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC2.92□□□□□ -1.94
HSPG2P98160 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
HSPG2P98160 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
HSPG2P98160 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
HSPG2P98160 RN7SKP267-201ENST00000410381 285 ntBASIC2.92□□□□□ -1.94
HSPG2P98160 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC2.92□□□□□ -1.94
HSPG2P98160 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms