Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
LIMK1P53667 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.45□□□□□ -1.54
LIMK1P53667 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LIMK1P53667 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.45□□□□□ -1.54
LIMK1P53667 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LIMK1P53667 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LIMK1P53667 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
LIMK1P53667 SNORA17.1-201ENST00000362945 126 ntBASIC5.45□□□□□ -1.54
LIMK1P53667 RNU6-178P-201ENST00000384631 104 ntBASIC5.45□□□□□ -1.54
LIMK1P53667 NCSTNP1-201ENST00000406229 144 ntBASIC5.45□□□□□ -1.54
LIMK1P53667 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.45□□□□□ -1.54
LIMK1P53667 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LIMK1P53667 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.45□□□□□ -1.54
LIMK1P53667 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.45□□□□□ -1.54
LIMK1P53667 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.45□□□□□ -1.54
LIMK1P53667 TPT1P12-201ENST00000448968 492 ntBASIC5.45□□□□□ -1.54
LIMK1P53667 AL513343.1-201ENST00000451818 792 ntBASIC5.45□□□□□ -1.54
LIMK1P53667 RSU1P1-201ENST00000453416 441 ntBASIC5.45□□□□□ -1.54
LIMK1P53667 NDUFA5P9-201ENST00000472609 340 ntBASIC5.45□□□□□ -1.54
LIMK1P53667 STRADBP1-201ENST00000478954 1281 ntBASIC5.45□□□□□ -1.54
LIMK1P53667 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.45□□□□□ -1.54
LIMK1P53667 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.45□□□□□ -1.54
LIMK1P53667 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.45□□□□□ -1.54
LIMK1P53667 PCNAP1-201ENST00000505363 709 ntBASIC5.45□□□□□ -1.54
LIMK1P53667 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.45□□□□□ -1.54
LIMK1P53667 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.45□□□□□ -1.54
LIMK1P53667 HMGB1P40-201ENST00000525121 540 ntBASIC5.45□□□□□ -1.54
LIMK1P53667 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.45□□□□□ -1.54
LIMK1P53667 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.45□□□□□ -1.54
LIMK1P53667 BNIP3P1-201ENST00000547295 580 ntBASIC5.45□□□□□ -1.54
LIMK1P53667 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LIMK1P53667 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.45□□□□□ -1.54
LIMK1P53667 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
LIMK1P53667 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.45□□□□□ -1.54
LIMK1P53667 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.45□□□□□ -1.54
LIMK1P53667 AC069307.1-201ENST00000602820 447 ntBASIC5.45□□□□□ -1.54
LIMK1P53667 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.45□□□□□ -1.54
LIMK1P53667 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
LIMK1P53667 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
LIMK1P53667 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LIMK1P53667 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LIMK1P53667 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LIMK1P53667 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
LIMK1P53667 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LIMK1P53667 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LIMK1P53667 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LIMK1P53667 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
LIMK1P53667 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.45□□□□□ -1.54
LIMK1P53667 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
LIMK1P53667 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
LIMK1P53667 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
LIMK1P53667 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LIMK1P53667 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LIMK1P53667 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LIMK1P53667 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
LIMK1P53667 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.45□□□□□ -1.54
LIMK1P53667 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.45□□□□□ -1.54
LIMK1P53667 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.44□□□□□ -1.54
LIMK1P53667 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
LIMK1P53667 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LIMK1P53667 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.44□□□□□ -1.54
LIMK1P53667 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LIMK1P53667 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LIMK1P53667 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.44□□□□□ -1.54
LIMK1P53667 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.44□□□□□ -1.54
LIMK1P53667 SNORA62-201ENST00000365493 153 ntBASIC5.44□□□□□ -1.54
LIMK1P53667 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LIMK1P53667 ST13P16-201ENST00000401760 781 ntBASIC5.44□□□□□ -1.54
LIMK1P53667 GLUD1P9-201ENST00000420997 1173 ntBASIC5.44□□□□□ -1.54
LIMK1P53667 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LIMK1P53667 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.44□□□□□ -1.54
LIMK1P53667 AC099063.2-201ENST00000446360 662 ntBASIC5.44□□□□□ -1.54
LIMK1P53667 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.44□□□□□ -1.54
LIMK1P53667 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.44□□□□□ -1.54
LIMK1P53667 AL603882.1-201ENST00000463059 681 ntBASIC5.44□□□□□ -1.54
LIMK1P53667 AC037198.2-201ENST00000478845 733 ntBASIC5.44□□□□□ -1.54
LIMK1P53667 AC068587.1-201ENST00000483613 781 ntBASIC5.44□□□□□ -1.54
LIMK1P53667 RPL38P3-201ENST00000484463 213 ntBASIC5.44□□□□□ -1.54
LIMK1P53667 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LIMK1P53667 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LIMK1P53667 EDDM3DP-201ENST00000554692 434 ntBASIC5.44□□□□□ -1.54
LIMK1P53667 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.44□□□□□ -1.54
LIMK1P53667 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.44□□□□□ -1.54
LIMK1P53667 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.44□□□□□ -1.54
LIMK1P53667 AC087783.2-201ENST00000605070 562 ntBASIC5.44□□□□□ -1.54
LIMK1P53667 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.44□□□□□ -1.54
LIMK1P53667 AC021106.3-201ENST00000623925 531 ntBASIC5.44□□□□□ -1.54
LIMK1P53667 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.44□□□□□ -1.54
LIMK1P53667 AC005618.4-201ENST00000625053 554 ntBASIC5.44□□□□□ -1.54
LIMK1P53667 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
LIMK1P53667 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
LIMK1P53667 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
LIMK1P53667 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.44□□□□□ -1.54
LIMK1P53667 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LIMK1P53667 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LIMK1P53667 AC110792.3-201ENST00000595906 1614 ntBASIC5.44□□□□□ -1.54
LIMK1P53667 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
LIMK1P53667 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LIMK1P53667 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LIMK1P53667 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms