Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
GPC3P51654 AC002524.1-201ENST00000411687 547 ntBASIC5.72□□□□□ -1.49
GPC3P51654 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.72□□□□□ -1.49
GPC3P51654 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.72□□□□□ -1.49
GPC3P51654 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.72□□□□□ -1.49
GPC3P51654 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.72□□□□□ -1.49
GPC3P51654 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.72□□□□□ -1.49
GPC3P51654 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
GPC3P51654 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.72□□□□□ -1.49
GPC3P51654 PA2G4P6-201ENST00000438325 1197 ntBASIC5.72□□□□□ -1.49
GPC3P51654 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.72□□□□□ -1.49
GPC3P51654 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.72□□□□□ -1.49
GPC3P51654 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.72□□□□□ -1.49
GPC3P51654 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.72□□□□□ -1.49
GPC3P51654 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.72□□□□□ -1.49
GPC3P51654 AC016559.2-201ENST00000510759 359 ntBASIC5.72□□□□□ -1.49
GPC3P51654 SNORD116-30-201ENST00000516468 85 ntBASIC5.72□□□□□ -1.49
GPC3P51654 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.72□□□□□ -1.49
GPC3P51654 OR5AZ1P-201ENST00000527448 943 ntBASIC5.72□□□□□ -1.49
GPC3P51654 AC027369.5-201ENST00000533838 755 ntBASIC5.72□□□□□ -1.49
GPC3P51654 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.72□□□□□ -1.49
GPC3P51654 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.72□□□□□ -1.49
GPC3P51654 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.72□□□□□ -1.49
GPC3P51654 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.72□□□□□ -1.49
GPC3P51654 AC009852.2-201ENST00000567898 485 ntBASIC5.72□□□□□ -1.49
GPC3P51654 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.72□□□□□ -1.49
GPC3P51654 AC011840.5-201ENST00000582125 771 ntBASIC5.72□□□□□ -1.49
GPC3P51654 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
GPC3P51654 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
GPC3P51654 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
GPC3P51654 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
GPC3P51654 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.72□□□□□ -1.49
GPC3P51654 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
GPC3P51654 RLIMP2-201ENST00000427891 1563 ntBASIC5.72□□□□□ -1.49
GPC3P51654 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
GPC3P51654 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
GPC3P51654 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.49
GPC3P51654 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.71□□□□□ -1.49
GPC3P51654 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
GPC3P51654 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.71□□□□□ -1.5
GPC3P51654 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
GPC3P51654 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
GPC3P51654 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
GPC3P51654 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
GPC3P51654 HYALP1-201ENST00000417674 1279 ntBASIC5.71□□□□□ -1.5
GPC3P51654 DDX39BP1-205ENST00000422507 192 ntBASIC5.71□□□□□ -1.5
GPC3P51654 AC090018.1-201ENST00000434369 367 ntBASIC5.71□□□□□ -1.5
GPC3P51654 AL161722.2-201ENST00000434731 981 ntBASIC5.71□□□□□ -1.5
GPC3P51654 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.71□□□□□ -1.5
GPC3P51654 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC5.71□□□□□ -1.5
GPC3P51654 HIGD1AP8-201ENST00000453927 274 ntBASIC5.71□□□□□ -1.5
GPC3P51654 RPL7P41-201ENST00000485823 957 ntBASIC5.71□□□□□ -1.5
GPC3P51654 RN7SL814P-201ENST00000487715 300 ntBASIC5.71□□□□□ -1.5
GPC3P51654 RPL37AP8-201ENST00000494116 276 ntBASIC5.71□□□□□ -1.5
GPC3P51654 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
GPC3P51654 AP001922.4-201ENST00000526967 290 ntBASIC5.71□□□□□ -1.5
GPC3P51654 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
GPC3P51654 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
GPC3P51654 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.71□□□□□ -1.5
GPC3P51654 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.71□□□□□ -1.5
GPC3P51654 AC027216.1-201ENST00000577726 685 ntBASIC5.71□□□□□ -1.5
GPC3P51654 MTCYBP13-201ENST00000578634 1093 ntBASIC5.71□□□□□ -1.5
GPC3P51654 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.71□□□□□ -1.5
GPC3P51654 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.71□□□□□ -1.5
GPC3P51654 AC010615.3-201ENST00000597319 394 ntBASIC5.71□□□□□ -1.5
GPC3P51654 AL022394.1-201ENST00000606979 292 ntBASIC5.71□□□□□ -1.5
GPC3P51654 AC116651.1-201ENST00000609724 556 ntBASIC5.71□□□□□ -1.5
GPC3P51654 AL049539.1-201ENST00000611964 459 ntBASIC5.71□□□□□ -1.5
GPC3P51654 AC026367.3-201ENST00000619032 590 ntBASIC5.71□□□□□ -1.5
GPC3P51654 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.71□□□□□ -1.5
GPC3P51654 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
GPC3P51654 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.71□□□□□ -1.5
GPC3P51654 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.71□□□□□ -1.5
GPC3P51654 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
GPC3P51654 TTC39DP-201ENST00000416781 1688 ntBASIC5.71□□□□□ -1.5
GPC3P51654 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
GPC3P51654 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
GPC3P51654 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
GPC3P51654 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
GPC3P51654 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.71□□□□□ -1.5
GPC3P51654 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.7□□□□□ -1.5
GPC3P51654 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
GPC3P51654 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
GPC3P51654 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
GPC3P51654 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.7□□□□□ -1.5
GPC3P51654 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
GPC3P51654 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.7□□□□□ -1.5
GPC3P51654 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
GPC3P51654 AC103591.2-201ENST00000265259 766 ntBASIC5.7□□□□□ -1.5
GPC3P51654 RNA5SP123-201ENST00000363244 119 ntBASIC5.7□□□□□ -1.5
GPC3P51654 RNU6-697P-201ENST00000363348 107 ntBASIC5.7□□□□□ -1.5
GPC3P51654 SNORA5.1-201ENST00000384275 131 ntBASIC5.7□□□□□ -1.5
GPC3P51654 MIR589-201ENST00000385238 99 ntBASIC5.7□□□□□ -1.5
GPC3P51654 AL078599.1-201ENST00000402075 293 ntBASIC5.7□□□□□ -1.5
GPC3P51654 GJA6P-201ENST00000415117 1042 ntBASIC5.7□□□□□ -1.5
GPC3P51654 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.7□□□□□ -1.5
GPC3P51654 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.7□□□□□ -1.5
GPC3P51654 HMGN2P27-201ENST00000427352 270 ntBASIC5.7□□□□□ -1.5
GPC3P51654 MTCO1P51-201ENST00000427672 1060 ntBASIC5.7□□□□□ -1.5
GPC3P51654 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms