Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RNF144AP50876 Y_RNA.445-201ENST00000384168 102 ntBASIC6.97□□□□□ -1.29
RNF144AP50876 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RNF144AP50876 BCRP8-201ENST00000412037 255 ntBASIC6.97□□□□□ -1.29
RNF144AP50876 AC009161.1-201ENST00000417306 376 ntBASIC6.97□□□□□ -1.29
RNF144AP50876 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC6.97□□□□□ -1.29
RNF144AP50876 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RNF144AP50876 AL645937.1-202ENST00000421799 937 ntBASIC6.97□□□□□ -1.29
RNF144AP50876 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC6.97□□□□□ -1.29
RNF144AP50876 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC6.97□□□□□ -1.29
RNF144AP50876 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC6.97□□□□□ -1.29
RNF144AP50876 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC6.97□□□□□ -1.29
RNF144AP50876 LINC00444-201ENST00000435617 215 ntTSL 5 BASIC6.97□□□□□ -1.29
RNF144AP50876 AC005040.1-201ENST00000437783 482 ntBASIC6.97□□□□□ -1.29
RNF144AP50876 AC002504.1-201ENST00000438281 691 ntBASIC6.97□□□□□ -1.29
RNF144AP50876 LSM1P1-201ENST00000438629 273 ntBASIC6.97□□□□□ -1.29
RNF144AP50876 HMGB1P18-201ENST00000438801 619 ntBASIC6.97□□□□□ -1.29
RNF144AP50876 AC002553.1-201ENST00000442828 802 ntBASIC6.97□□□□□ -1.29
RNF144AP50876 RPL4P2-201ENST00000447259 1282 ntBASIC6.97□□□□□ -1.29
RNF144AP50876 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC6.97□□□□□ -1.29
RNF144AP50876 SLC31A1P1-201ENST00000451221 567 ntBASIC6.97□□□□□ -1.29
RNF144AP50876 FAM74A1-201ENST00000465257 623 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RNF144AP50876 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RNF144AP50876 RPL12P40-201ENST00000467028 488 ntBASIC6.97□□□□□ -1.29
RNF144AP50876 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC6.97□□□□□ -1.29
RNF144AP50876 RN7SL153P-201ENST00000486501 292 ntBASIC6.97□□□□□ -1.29
RNF144AP50876 RPS3AP50-201ENST00000487064 803 ntBASIC6.97□□□□□ -1.29
RNF144AP50876 AC106872.3-201ENST00000495104 446 ntBASIC6.97□□□□□ -1.29
RNF144AP50876 SSX8-201ENST00000506270 579 ntBASIC6.97□□□□□ -1.29
RNF144AP50876 AC108120.1-201ENST00000506543 991 ntBASIC6.97□□□□□ -1.29
RNF144AP50876 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RNF144AP50876 ANKRD55-205ENST00000513241 626 ntTSL 5 BASIC6.97□□□□□ -1.29
RNF144AP50876 SNX18P27-201ENST00000523611 779 ntBASIC6.97□□□□□ -1.29
RNF144AP50876 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC6.97□□□□□ -1.29
RNF144AP50876 OR5B19P-201ENST00000531766 928 ntBASIC6.97□□□□□ -1.29
RNF144AP50876 OR7E1P-201ENST00000533891 958 ntBASIC6.97□□□□□ -1.29
RNF144AP50876 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC6.97□□□□□ -1.29
RNF144AP50876 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC6.97□□□□□ -1.29
RNF144AP50876 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.97□□□□□ -1.29
RNF144AP50876 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC6.97□□□□□ -1.29
RNF144AP50876 BMS1P15-201ENST00000554269 1141 ntBASIC6.97□□□□□ -1.29
RNF144AP50876 AL109766.1-201ENST00000555080 552 ntBASIC6.97□□□□□ -1.29
RNF144AP50876 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RNF144AP50876 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RNF144AP50876 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC6.97□□□□□ -1.29
RNF144AP50876 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC6.97□□□□□ -1.29
RNF144AP50876 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC6.97□□□□□ -1.29
RNF144AP50876 AP001180.3-201ENST00000582221 145 ntBASIC6.97□□□□□ -1.29
RNF144AP50876 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC6.97□□□□□ -1.29
RNF144AP50876 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.97□□□□□ -1.29
RNF144AP50876 AC007136.1-201ENST00000589141 199 ntBASIC6.97□□□□□ -1.29
RNF144AP50876 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC6.97□□□□□ -1.29
RNF144AP50876 AL953862.2-201ENST00000603089 820 ntBASIC6.97□□□□□ -1.29
RNF144AP50876 XIAPP1-201ENST00000603162 600 ntBASIC6.97□□□□□ -1.29
RNF144AP50876 AL137190.1-201ENST00000603288 282 ntBASIC6.97□□□□□ -1.29
RNF144AP50876 AL133338.2-201ENST00000604292 736 ntBASIC6.97□□□□□ -1.29
RNF144AP50876 CR382285.1-202ENST00000604687 547 ntBASIC6.97□□□□□ -1.29
RNF144AP50876 RN7SL760P-201ENST00000607344 270 ntBASIC6.97□□□□□ -1.29
RNF144AP50876 AC244196.3-201ENST00000614171 374 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
RNF144AP50876 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC6.97□□□□□ -1.29
RNF144AP50876 AC129908.1-201ENST00000624553 648 ntBASIC6.97□□□□□ -1.29
RNF144AP50876 AC093909.6-201ENST00000624757 775 ntBASIC6.97□□□□□ -1.29
RNF144AP50876 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.97□□□□□ -1.29
RNF144AP50876 SRP54-214ENST00000630962 162 ntTSL 5 BASIC6.97□□□□□ -1.29
RNF144AP50876 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC6.97□□□□□ -1.29
RNF144AP50876 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.97□□□□□ -1.29
RNF144AP50876 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
RNF144AP50876 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
RNF144AP50876 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RNF144AP50876 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
RNF144AP50876 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC6.97□□□□□ -1.29
RNF144AP50876 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RNF144AP50876 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
RNF144AP50876 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
RNF144AP50876 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RNF144AP50876 AC025574.1-201ENST00000554784 1653 ntBASIC6.96□□□□□ -1.29
RNF144AP50876 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.96□□□□□ -1.29
RNF144AP50876 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.29
RNF144AP50876 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
RNF144AP50876 LARP1BP1-201ENST00000506036 1359 ntBASIC6.96□□□□□ -1.29
RNF144AP50876 CASC19-260ENST00000641828 2001 ntBASIC6.96□□□□□ -1.29
RNF144AP50876 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
RNF144AP50876 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.96□□□□□ -1.29
RNF144AP50876 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.29
RNF144AP50876 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
RNF144AP50876 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.96□□□□□ -1.29
RNF144AP50876 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
RNF144AP50876 SPATA31C2-201ENST00000324915 3777 ntBASIC6.96□□□□□ -1.3
RNF144AP50876 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.3
RNF144AP50876 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC6.96□□□□□ -1.3
RNF144AP50876 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.96□□□□□ -1.3
RNF144AP50876 TTC9C-202ENST00000316461 1080 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
RNF144AP50876 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
RNF144AP50876 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
RNF144AP50876 AMELY-202ENST00000383036 621 ntTSL 5 BASIC6.96□□□□□ -1.3
RNF144AP50876 SNORD115.1-201ENST00000391109 76 ntBASIC6.96□□□□□ -1.3
RNF144AP50876 RNA5SP105-201ENST00000391123 113 ntBASIC6.96□□□□□ -1.3
RNF144AP50876 RPL32P23-201ENST00000397237 405 ntBASIC6.96□□□□□ -1.3
RNF144AP50876 AL390316.1-201ENST00000406279 553 ntBASIC6.96□□□□□ -1.3
RNF144AP50876 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms