Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AL049767.1-202ENST00000637826 242 ntBASIC5.23□□□□□ -1.57
SLC1A1P43005 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SLC1A1P43005 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SLC1A1P43005 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.23□□□□□ -1.57
SLC1A1P43005 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SLC1A1P43005 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SLC1A1P43005 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SLC1A1P43005 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.23□□□□□ -1.57
SLC1A1P43005 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SLC1A1P43005 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.23□□□□□ -1.57
SLC1A1P43005 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SLC1A1P43005 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
SLC1A1P43005 DHX9P1-201ENST00000436565 3076 ntBASIC5.22□□□□□ -1.57
SLC1A1P43005 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
SLC1A1P43005 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.22□□□□□ -1.57
SLC1A1P43005 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
SLC1A1P43005 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.22□□□□□ -1.57
SLC1A1P43005 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.22□□□□□ -1.57
SLC1A1P43005 ECM1P2-201ENST00000503354 1577 ntBASIC5.22□□□□□ -1.57
SLC1A1P43005 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SLC1A1P43005 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SLC1A1P43005 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SLC1A1P43005 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
SLC1A1P43005 BTBD10P1-201ENST00000549824 1352 ntBASIC5.22□□□□□ -1.57
SLC1A1P43005 CASC19-255ENST00000641733 1385 ntBASIC5.22□□□□□ -1.57
SLC1A1P43005 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SLC1A1P43005 RNU4-44P-201ENST00000363050 141 ntBASIC5.22□□□□□ -1.57
SLC1A1P43005 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
SLC1A1P43005 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
SLC1A1P43005 SNORA70.10-201ENST00000384515 134 ntBASIC5.22□□□□□ -1.57
SLC1A1P43005 AL078599.1-201ENST00000402075 293 ntBASIC5.22□□□□□ -1.57
SLC1A1P43005 AL136116.2-201ENST00000404020 785 ntBASIC5.22□□□□□ -1.57
SLC1A1P43005 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.22□□□□□ -1.57
SLC1A1P43005 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.22□□□□□ -1.57
SLC1A1P43005 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.22□□□□□ -1.57
SLC1A1P43005 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.22□□□□□ -1.57
SLC1A1P43005 AC073052.1-201ENST00000440417 714 ntBASIC5.22□□□□□ -1.57
SLC1A1P43005 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.22□□□□□ -1.57
SLC1A1P43005 TCEA1P1-201ENST00000449716 880 ntBASIC5.22□□□□□ -1.57
SLC1A1P43005 IGHV5-78-201ENST00000450948 295 ntBASIC5.22□□□□□ -1.57
SLC1A1P43005 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SLC1A1P43005 AC093890.1-201ENST00000502554 540 ntBASIC5.22□□□□□ -1.57
SLC1A1P43005 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.22□□□□□ -1.57
SLC1A1P43005 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.22□□□□□ -1.57
SLC1A1P43005 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.22□□□□□ -1.57
SLC1A1P43005 CYCSP40-201ENST00000575927 294 ntBASIC5.22□□□□□ -1.57
SLC1A1P43005 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.22□□□□□ -1.57
SLC1A1P43005 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.22□□□□□ -1.57
SLC1A1P43005 AC011447.4-201ENST00000587562 111 ntBASIC5.22□□□□□ -1.57
SLC1A1P43005 AL512329.2-201ENST00000607350 548 ntBASIC5.22□□□□□ -1.57
SLC1A1P43005 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.22□□□□□ -1.57
SLC1A1P43005 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SLC1A1P43005 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SLC1A1P43005 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SLC1A1P43005 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SLC1A1P43005 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
SLC1A1P43005 AC083843.3-201ENST00000623679 2186 ntBASIC5.22□□□□□ -1.57
SLC1A1P43005 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SLC1A1P43005 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SLC1A1P43005 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.22□□□□□ -1.57
SLC1A1P43005 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SLC1A1P43005 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.22□□□□□ -1.57
SLC1A1P43005 ZNF652P1-201ENST00000442420 1309 ntBASIC5.22□□□□□ -1.57
SLC1A1P43005 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.21□□□□□ -1.57
SLC1A1P43005 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
SLC1A1P43005 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.21□□□□□ -1.57
SLC1A1P43005 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.21□□□□□ -1.57
SLC1A1P43005 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SLC1A1P43005 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.21□□□□□ -1.58
SLC1A1P43005 NXF4-202ENST00000416098 1465 ntBASIC5.21□□□□□ -1.58
SLC1A1P43005 MTCO1P46-201ENST00000451639 1491 ntBASIC5.21□□□□□ -1.58
SLC1A1P43005 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.21□□□□□ -1.58
SLC1A1P43005 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SLC1A1P43005 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.21□□□□□ -1.58
SLC1A1P43005 RN7SKP162-201ENST00000363605 345 ntBASIC5.21□□□□□ -1.58
SLC1A1P43005 SNORA66-201ENST00000384792 133 ntBASIC5.21□□□□□ -1.58
SLC1A1P43005 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SLC1A1P43005 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
SLC1A1P43005 RPL35AP24-201ENST00000413846 330 ntBASIC5.21□□□□□ -1.58
SLC1A1P43005 RPL36AP10-201ENST00000421785 322 ntBASIC5.21□□□□□ -1.58
SLC1A1P43005 AC002069.1-201ENST00000429649 1159 ntBASIC5.21□□□□□ -1.58
SLC1A1P43005 RPL34P6-201ENST00000432390 345 ntBASIC5.21□□□□□ -1.58
SLC1A1P43005 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.21□□□□□ -1.58
SLC1A1P43005 MRPL48P1-201ENST00000445390 636 ntBASIC5.21□□□□□ -1.58
SLC1A1P43005 AL389915.2-201ENST00000454576 441 ntBASIC5.21□□□□□ -1.58
SLC1A1P43005 AL591473.1-201ENST00000464297 313 ntBASIC5.21□□□□□ -1.58
SLC1A1P43005 AC090686.1-201ENST00000481577 749 ntBASIC5.21□□□□□ -1.58
SLC1A1P43005 RPS4XP1-201ENST00000482189 787 ntBASIC5.21□□□□□ -1.58
SLC1A1P43005 RN7SL346P-201ENST00000491561 294 ntBASIC5.21□□□□□ -1.58
SLC1A1P43005 AC020890.1-201ENST00000491837 504 ntBASIC5.21□□□□□ -1.58
SLC1A1P43005 OR2A3P-201ENST00000493774 953 ntBASIC5.21□□□□□ -1.58
SLC1A1P43005 AC138409.2-202ENST00000507274 458 ntBASIC5.21□□□□□ -1.58
SLC1A1P43005 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SLC1A1P43005 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.21□□□□□ -1.58
SLC1A1P43005 AC105254.2-201ENST00000603636 436 ntBASIC5.21□□□□□ -1.58
SLC1A1P43005 AC126915.2-201ENST00000610957 190 ntBASIC5.21□□□□□ -1.58
SLC1A1P43005 MIR8069-1-201ENST00000616627 86 ntBASIC5.21□□□□□ -1.58
SLC1A1P43005 MIR8069-2-201ENST00000621412 86 ntBASIC5.21□□□□□ -1.58
SLC1A1P43005 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.21□□□□□ -1.58
SLC1A1P43005 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms