Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXD13P35453 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXD13P35453 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HOXD13P35453 NUDT19P3-201ENST00000404698 555 ntBASIC5.72□□□□□ -1.49
HOXD13P35453 MIR1182-201ENST00000408363 97 ntBASIC5.72□□□□□ -1.49
HOXD13P35453 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.72□□□□□ -1.49
HOXD13P35453 AL590806.1-201ENST00000415818 853 ntBASIC5.72□□□□□ -1.49
HOXD13P35453 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
HOXD13P35453 ARL4AP4-201ENST00000434170 518 ntBASIC5.72□□□□□ -1.49
HOXD13P35453 RPL12P18-201ENST00000437175 325 ntBASIC5.72□□□□□ -1.49
HOXD13P35453 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.72□□□□□ -1.49
HOXD13P35453 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.72□□□□□ -1.49
HOXD13P35453 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.72□□□□□ -1.49
HOXD13P35453 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.72□□□□□ -1.49
HOXD13P35453 AL133244.1-201ENST00000456007 258 ntBASIC5.72□□□□□ -1.49
HOXD13P35453 BX284632.1-201ENST00000478218 541 ntBASIC5.72□□□□□ -1.49
HOXD13P35453 RPL7P40-201ENST00000481703 745 ntBASIC5.72□□□□□ -1.49
HOXD13P35453 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.72□□□□□ -1.49
HOXD13P35453 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
HOXD13P35453 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.72□□□□□ -1.49
HOXD13P35453 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.72□□□□□ -1.49
HOXD13P35453 AL049779.2-201ENST00000553847 315 ntBASIC5.72□□□□□ -1.49
HOXD13P35453 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXD13P35453 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXD13P35453 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXD13P35453 PRPF19P1-201ENST00000584766 898 ntBASIC5.72□□□□□ -1.49
HOXD13P35453 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.72□□□□□ -1.49
HOXD13P35453 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.72□□□□□ -1.49
HOXD13P35453 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXD13P35453 AC108359.1-201ENST00000616451 1211 ntBASIC5.72□□□□□ -1.49
HOXD13P35453 AL356274.1-201ENST00000617064 410 ntBASIC5.72□□□□□ -1.49
HOXD13P35453 AL356490.1-201ENST00000623079 479 ntBASIC5.72□□□□□ -1.49
HOXD13P35453 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXD13P35453 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.72□□□□□ -1.49
HOXD13P35453 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
HOXD13P35453 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
HOXD13P35453 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXD13P35453 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HOXD13P35453 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
HOXD13P35453 AC009501.3-201ENST00000605001 1352 ntBASIC5.71□□□□□ -1.5
HOXD13P35453 AC092376.2-201ENST00000622621 4116 ntBASIC5.71□□□□□ -1.5
HOXD13P35453 AC093775.1-201ENST00000624154 1868 ntBASIC5.71□□□□□ -1.5
HOXD13P35453 PANDAR-201ENST00000629595 1506 ntBASIC5.71□□□□□ -1.5
HOXD13P35453 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
HOXD13P35453 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HOXD13P35453 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HOXD13P35453 SNORA51.1-201ENST00000363243 140 ntBASIC5.71□□□□□ -1.5
HOXD13P35453 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HOXD13P35453 DUTP5-201ENST00000406790 469 ntBASIC5.71□□□□□ -1.5
HOXD13P35453 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.71□□□□□ -1.5
HOXD13P35453 RANP4-201ENST00000413361 655 ntBASIC5.71□□□□□ -1.5
HOXD13P35453 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.71□□□□□ -1.5
HOXD13P35453 SLC35E1P1-201ENST00000419313 864 ntBASIC5.71□□□□□ -1.5
HOXD13P35453 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HOXD13P35453 AC090018.1-201ENST00000434369 367 ntBASIC5.71□□□□□ -1.5
HOXD13P35453 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXD13P35453 AL691517.1-201ENST00000440833 1235 ntBASIC5.71□□□□□ -1.5
HOXD13P35453 MTND2P25-201ENST00000449028 610 ntBASIC5.71□□□□□ -1.5
HOXD13P35453 CBX1P2-201ENST00000453841 458 ntBASIC5.71□□□□□ -1.5
HOXD13P35453 Z92846.1-201ENST00000456203 268 ntBASIC5.71□□□□□ -1.5
HOXD13P35453 RN7SL189P-201ENST00000468631 289 ntBASIC5.71□□□□□ -1.5
HOXD13P35453 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HOXD13P35453 AC022133.1-201ENST00000490961 571 ntBASIC5.71□□□□□ -1.5
HOXD13P35453 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HOXD13P35453 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.71□□□□□ -1.5
HOXD13P35453 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.71□□□□□ -1.5
HOXD13P35453 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXD13P35453 AC020937.1-201ENST00000519677 1013 ntBASIC5.71□□□□□ -1.5
HOXD13P35453 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.71□□□□□ -1.5
HOXD13P35453 AC018442.3-201ENST00000523025 183 ntBASIC5.71□□□□□ -1.5
HOXD13P35453 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.71□□□□□ -1.5
HOXD13P35453 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HOXD13P35453 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXD13P35453 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.71□□□□□ -1.5
HOXD13P35453 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.71□□□□□ -1.5
HOXD13P35453 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.71□□□□□ -1.5
HOXD13P35453 OR4H6P-202ENST00000603819 340 ntBASIC5.71□□□□□ -1.5
HOXD13P35453 AL512329.2-201ENST00000607350 548 ntBASIC5.71□□□□□ -1.5
HOXD13P35453 CR589904.2-201ENST00000612533 440 ntBASIC5.71□□□□□ -1.5
HOXD13P35453 AC118658.2-201ENST00000618697 459 ntBASIC5.71□□□□□ -1.5
HOXD13P35453 AC091932.2-201ENST00000623014 291 ntBASIC5.71□□□□□ -1.5
HOXD13P35453 AC074101.1-201ENST00000637861 241 ntBASIC5.71□□□□□ -1.5
HOXD13P35453 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
HOXD13P35453 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.71□□□□□ -1.5
HOXD13P35453 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.71□□□□□ -1.5
HOXD13P35453 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HOXD13P35453 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HOXD13P35453 PABPC1P6-201ENST00000445594 1829 ntBASIC5.71□□□□□ -1.5
HOXD13P35453 HSPA8P14-201ENST00000552265 1805 ntBASIC5.71□□□□□ -1.5
HOXD13P35453 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.71□□□□□ -1.5
HOXD13P35453 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HOXD13P35453 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HOXD13P35453 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.71□□□□□ -1.5
HOXD13P35453 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HOXD13P35453 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.7□□□□□ -1.5
HOXD13P35453 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HOXD13P35453 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HOXD13P35453 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.7□□□□□ -1.5
HOXD13P35453 ADAM5-202ENST00000399789 1942 ntBASIC5.7□□□□□ -1.5
HOXD13P35453 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 141.6 ms