Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC7.37□□□□□ -1.23
ERCC3P19447 RPL7P4-203ENST00000430239 730 ntBASIC7.37□□□□□ -1.23
ERCC3P19447 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC7.37□□□□□ -1.23
ERCC3P19447 AC016772.1-201ENST00000444170 1261 ntBASIC7.37□□□□□ -1.23
ERCC3P19447 EEF1B2P5-201ENST00000444820 548 ntBASIC7.37□□□□□ -1.23
ERCC3P19447 AC097463.1-201ENST00000447288 481 ntBASIC7.37□□□□□ -1.23
ERCC3P19447 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC7.37□□□□□ -1.23
ERCC3P19447 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC7.37□□□□□ -1.23
ERCC3P19447 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC7.37□□□□□ -1.23
ERCC3P19447 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC7.37□□□□□ -1.23
ERCC3P19447 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
ERCC3P19447 RPL23AP12-201ENST00000467573 473 ntBASIC7.37□□□□□ -1.23
ERCC3P19447 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC7.37□□□□□ -1.23
ERCC3P19447 VPS26AP1-201ENST00000483197 979 ntBASIC7.37□□□□□ -1.23
ERCC3P19447 AC063943.2-201ENST00000495697 534 ntBASIC7.37□□□□□ -1.23
ERCC3P19447 AC022206.1-201ENST00000495947 347 ntBASIC7.37□□□□□ -1.23
ERCC3P19447 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC7.37□□□□□ -1.23
ERCC3P19447 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC7.37□□□□□ -1.23
ERCC3P19447 Y_RNA.655-201ENST00000515919 96 ntBASIC7.37□□□□□ -1.23
ERCC3P19447 CDC42P3-201ENST00000518493 633 ntBASIC7.37□□□□□ -1.23
ERCC3P19447 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC7.37□□□□□ -1.23
ERCC3P19447 TRIM77BP-201ENST00000524985 1119 ntBASIC7.37□□□□□ -1.23
ERCC3P19447 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC7.37□□□□□ -1.23
ERCC3P19447 UBE2NP1-201ENST00000545592 458 ntBASIC7.37□□□□□ -1.23
ERCC3P19447 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
ERCC3P19447 AC023161.2-201ENST00000551218 780 ntBASIC7.37□□□□□ -1.23
ERCC3P19447 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
ERCC3P19447 AC116553.2-201ENST00000564203 463 ntBASIC7.37□□□□□ -1.23
ERCC3P19447 AC135628.1-201ENST00000568867 534 ntBASIC7.37□□□□□ -1.23
ERCC3P19447 MIR4666A-201ENST00000580160 79 ntBASIC7.37□□□□□ -1.23
ERCC3P19447 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC7.37□□□□□ -1.23
ERCC3P19447 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC7.37□□□□□ -1.23
ERCC3P19447 AC096553.1-201ENST00000605169 829 ntBASIC7.37□□□□□ -1.23
ERCC3P19447 AL451049.1-201ENST00000608672 497 ntBASIC7.37□□□□□ -1.23
ERCC3P19447 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC7.37□□□□□ -1.23
ERCC3P19447 AL096712.1-201ENST00000614561 159 ntBASIC7.37□□□□□ -1.23
ERCC3P19447 AC090116.1-201ENST00000615679 446 ntBASIC7.37□□□□□ -1.23
ERCC3P19447 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC7.37□□□□□ -1.23
ERCC3P19447 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC7.37□□□□□ -1.23
ERCC3P19447 CASC22-202ENST00000628396 802 ntTSL 5 BASIC7.37□□□□□ -1.23
ERCC3P19447 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC7.37□□□□□ -1.23
ERCC3P19447 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
ERCC3P19447 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
ERCC3P19447 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC7.37□□□□□ -1.23
ERCC3P19447 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
ERCC3P19447 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
ERCC3P19447 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC7.37□□□□□ -1.23
ERCC3P19447 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC7.37□□□□□ -1.23
ERCC3P19447 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
ERCC3P19447 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
ERCC3P19447 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC7.37□□□□□ -1.23
ERCC3P19447 AC027575.3-201ENST00000583058 2747 ntBASIC7.36□□□□□ -1.23
ERCC3P19447 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
ERCC3P19447 AC046144.1-201ENST00000478559 1853 ntBASIC7.36□□□□□ -1.23
ERCC3P19447 AC005618.1-201ENST00000606901 3148 ntBASIC7.36□□□□□ -1.23
ERCC3P19447 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
ERCC3P19447 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC7.36□□□□□ -1.23
ERCC3P19447 AL355852.1-201ENST00000454081 1771 ntBASIC7.36□□□□□ -1.23
ERCC3P19447 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
ERCC3P19447 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC7.36□□□□□ -1.23
ERCC3P19447 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC7.36□□□□□ -1.23
ERCC3P19447 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC7.36□□□□□ -1.23
ERCC3P19447 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
ERCC3P19447 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC7.36□□□□□ -1.23
ERCC3P19447 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
ERCC3P19447 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
ERCC3P19447 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC7.36□□□□□ -1.23
ERCC3P19447 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
ERCC3P19447 SNORA51.9-201ENST00000384295 124 ntBASIC7.36□□□□□ -1.23
ERCC3P19447 Y_RNA.560-201ENST00000384689 102 ntBASIC7.36□□□□□ -1.23
ERCC3P19447 RNA5SP80-201ENST00000410475 111 ntBASIC7.36□□□□□ -1.23
ERCC3P19447 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC7.36□□□□□ -1.23
ERCC3P19447 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC7.36□□□□□ -1.23
ERCC3P19447 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
ERCC3P19447 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC7.36□□□□□ -1.23
ERCC3P19447 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC7.36□□□□□ -1.23
ERCC3P19447 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC7.36□□□□□ -1.23
ERCC3P19447 ELOCP8-201ENST00000439309 332 ntBASIC7.36□□□□□ -1.23
ERCC3P19447 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC7.36□□□□□ -1.23
ERCC3P19447 ELOCP15-201ENST00000442090 332 ntBASIC7.36□□□□□ -1.23
ERCC3P19447 AL590004.3-202ENST00000445883 451 ntBASIC7.36□□□□□ -1.23
ERCC3P19447 PPIAP20-201ENST00000449839 135 ntBASIC7.36□□□□□ -1.23
ERCC3P19447 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC7.36□□□□□ -1.23
ERCC3P19447 SEPT7P3-201ENST00000455017 621 ntBASIC7.36□□□□□ -1.23
ERCC3P19447 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC7.36□□□□□ -1.23
ERCC3P19447 MTND2P28-201ENST00000457540 1044 ntBASIC7.36□□□□□ -1.23
ERCC3P19447 MTND1P16-201ENST00000465177 898 ntBASIC7.36□□□□□ -1.23
ERCC3P19447 MTND4LP3-201ENST00000468320 276 ntBASIC7.36□□□□□ -1.23
ERCC3P19447 RN7SL643P-201ENST00000471845 291 ntBASIC7.36□□□□□ -1.23
ERCC3P19447 LSM3P4-201ENST00000502948 309 ntBASIC7.36□□□□□ -1.23
ERCC3P19447 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC7.36□□□□□ -1.23
ERCC3P19447 IGHVIII-47-1-201ENST00000518187 331 ntBASIC7.36□□□□□ -1.23
ERCC3P19447 IGLVIV-64-201ENST00000518581 301 ntBASIC7.36□□□□□ -1.23
ERCC3P19447 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC7.36□□□□□ -1.23
ERCC3P19447 AC087808.1-201ENST00000520501 361 ntBASIC7.36□□□□□ -1.23
ERCC3P19447 AP005136.2-201ENST00000583253 1049 ntBASIC7.36□□□□□ -1.23
ERCC3P19447 AC008507.3-201ENST00000585753 472 ntBASIC7.36□□□□□ -1.23
ERCC3P19447 TEX41-218ENST00000596540 882 ntTSL 5 BASIC7.36□□□□□ -1.23
ERCC3P19447 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC7.36□□□□□ -1.23
ERCC3P19447 AC011453.2-201ENST00000603737 729 ntBASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms