Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 AC023245.2-201ENST00000530760 2978 ntBASIC7.18□□□□□ -1.26
HOXD8P13378 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC7.18□□□□□ -1.26
HOXD8P13378 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC7.18□□□□□ -1.26
HOXD8P13378 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC7.17□□□□□ -1.26
HOXD8P13378 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HOXD8P13378 TEX21P-201ENST00000447107 1476 ntBASIC7.17□□□□□ -1.26
HOXD8P13378 AC011455.2-201ENST00000599320 3336 ntBASIC7.17□□□□□ -1.26
HOXD8P13378 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC7.17□□□□□ -1.26
HOXD8P13378 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC7.17□□□□□ -1.26
HOXD8P13378 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HOXD8P13378 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
HOXD8P13378 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
HOXD8P13378 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HOXD8P13378 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HOXD8P13378 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
HOXD8P13378 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
HOXD8P13378 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HOXD8P13378 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
HOXD8P13378 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HOXD8P13378 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.17□□□□□ -1.26
HOXD8P13378 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HOXD8P13378 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
HOXD8P13378 AC062022.1-201ENST00000451026 1684 ntBASIC7.17□□□□□ -1.26
HOXD8P13378 CASC19-228ENST00000641414 1684 ntBASIC7.17□□□□□ -1.26
HOXD8P13378 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
HOXD8P13378 RNU1-46P-201ENST00000384425 164 ntBASIC7.17□□□□□ -1.26
HOXD8P13378 AL713922.1-201ENST00000416477 747 ntBASIC7.17□□□□□ -1.26
HOXD8P13378 NUP35P2-201ENST00000416748 943 ntBASIC7.17□□□□□ -1.26
HOXD8P13378 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC7.17□□□□□ -1.26
HOXD8P13378 AC009480.2-201ENST00000422916 432 ntBASIC7.17□□□□□ -1.26
HOXD8P13378 SLC44A3-AS1-205ENST00000424505 612 ntBASIC7.17□□□□□ -1.26
HOXD8P13378 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC7.17□□□□□ -1.26
HOXD8P13378 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HOXD8P13378 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC7.17□□□□□ -1.26
HOXD8P13378 BTF3P10-201ENST00000433415 495 ntBASIC7.17□□□□□ -1.26
HOXD8P13378 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC7.17□□□□□ -1.26
HOXD8P13378 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC7.17□□□□□ -1.26
HOXD8P13378 AC110602.1-201ENST00000437414 318 ntBASIC7.17□□□□□ -1.26
HOXD8P13378 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC7.17□□□□□ -1.26
HOXD8P13378 MTCO3P18-201ENST00000440206 761 ntBASIC7.17□□□□□ -1.26
HOXD8P13378 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC7.17□□□□□ -1.26
HOXD8P13378 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC7.17□□□□□ -1.26
HOXD8P13378 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC7.17□□□□□ -1.26
HOXD8P13378 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC7.17□□□□□ -1.26
HOXD8P13378 KLF3P2-201ENST00000465138 268 ntBASIC7.17□□□□□ -1.26
HOXD8P13378 RPL34P33-201ENST00000486062 334 ntBASIC7.17□□□□□ -1.26
HOXD8P13378 RPS4XP15-201ENST00000489210 795 ntBASIC7.17□□□□□ -1.26
HOXD8P13378 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC7.17□□□□□ -1.26
HOXD8P13378 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC7.17□□□□□ -1.26
HOXD8P13378 AC104108.1-201ENST00000509930 412 ntBASIC7.17□□□□□ -1.26
HOXD8P13378 IGKV3D-25-201ENST00000519599 235 ntBASIC7.17□□□□□ -1.26
HOXD8P13378 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC7.17□□□□□ -1.26
HOXD8P13378 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC7.17□□□□□ -1.26
HOXD8P13378 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC7.17□□□□□ -1.26
HOXD8P13378 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC7.17□□□□□ -1.26
HOXD8P13378 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC7.17□□□□□ -1.26
HOXD8P13378 AC006504.3-201ENST00000586818 523 ntBASIC7.17□□□□□ -1.26
HOXD8P13378 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC7.17□□□□□ -1.26
HOXD8P13378 AL390816.3-201ENST00000604527 1066 ntBASIC7.17□□□□□ -1.26
HOXD8P13378 AC009994.1-201ENST00000606889 253 ntBASIC7.17□□□□□ -1.26
HOXD8P13378 AL353726.1-201ENST00000614041 1000 ntBASIC7.17□□□□□ -1.26
HOXD8P13378 AP004607.9-201ENST00000618202 316 ntBASIC7.17□□□□□ -1.26
HOXD8P13378 AC112204.3-201ENST00000623822 332 ntBASIC7.17□□□□□ -1.26
HOXD8P13378 AL359697.1-201ENST00000624879 587 ntBASIC7.17□□□□□ -1.26
HOXD8P13378 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HOXD8P13378 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
HOXD8P13378 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
HOXD8P13378 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HOXD8P13378 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HOXD8P13378 EEF1A1P9-201ENST00000514975 1383 ntBASIC7.17□□□□□ -1.26
HOXD8P13378 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HOXD8P13378 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
HOXD8P13378 AC125238.2-201ENST00000430003 1440 ntBASIC7.17□□□□□ -1.26
HOXD8P13378 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC7.17□□□□□ -1.26
HOXD8P13378 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC7.17□□□□□ -1.26
HOXD8P13378 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC7.17□□□□□ -1.26
HOXD8P13378 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
HOXD8P13378 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC7.16□□□□□ -1.26
HOXD8P13378 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HOXD8P13378 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC7.16□□□□□ -1.26
HOXD8P13378 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
HOXD8P13378 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HOXD8P13378 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HOXD8P13378 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HOXD8P13378 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HOXD8P13378 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC7.16□□□□□ -1.26
HOXD8P13378 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC7.16□□□□□ -1.26
HOXD8P13378 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HOXD8P13378 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HOXD8P13378 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HOXD8P13378 SNORD16-201ENST00000362803 99 ntBASIC7.16□□□□□ -1.26
HOXD8P13378 RNU4-76P-201ENST00000364509 141 ntBASIC7.16□□□□□ -1.26
HOXD8P13378 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC7.16□□□□□ -1.26
HOXD8P13378 RPS26P38-201ENST00000414476 348 ntBASIC7.16□□□□□ -1.26
HOXD8P13378 RPL23AP39-201ENST00000415533 405 ntBASIC7.16□□□□□ -1.26
HOXD8P13378 AL139413.1-201ENST00000421309 217 ntBASIC7.16□□□□□ -1.26
HOXD8P13378 AC006065.1-201ENST00000422539 802 ntBASIC7.16□□□□□ -1.26
HOXD8P13378 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC7.16□□□□□ -1.26
HOXD8P13378 OR8F1P-201ENST00000425243 930 ntBASIC7.16□□□□□ -1.26
HOXD8P13378 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms