Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 OR51H2P-202ENST00000641424 3046 ntBASIC5.52□□□□□ -1.53
TPM1P09493 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TPM1P09493 RNA5SP234-201ENST00000363916 119 ntBASIC5.52□□□□□ -1.53
TPM1P09493 RN7SKP187-201ENST00000365536 330 ntBASIC5.52□□□□□ -1.53
TPM1P09493 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.52□□□□□ -1.53
TPM1P09493 VDAC2P1-201ENST00000399358 958 ntBASIC5.52□□□□□ -1.53
TPM1P09493 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.52□□□□□ -1.53
TPM1P09493 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TPM1P09493 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.52□□□□□ -1.53
TPM1P09493 AL390119.1-201ENST00000440329 312 ntBASIC5.52□□□□□ -1.53
TPM1P09493 TXNP5-201ENST00000441043 315 ntBASIC5.52□□□□□ -1.53
TPM1P09493 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TPM1P09493 MRPL48P1-201ENST00000445390 636 ntBASIC5.52□□□□□ -1.53
TPM1P09493 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TPM1P09493 AL645937.3-201ENST00000453647 936 ntBASIC5.52□□□□□ -1.53
TPM1P09493 RPL7P45-201ENST00000455851 743 ntBASIC5.52□□□□□ -1.53
TPM1P09493 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TPM1P09493 AC108751.2-201ENST00000469993 231 ntBASIC5.52□□□□□ -1.53
TPM1P09493 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.52□□□□□ -1.53
TPM1P09493 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TPM1P09493 AC074087.1-201ENST00000512059 724 ntBASIC5.52□□□□□ -1.53
TPM1P09493 RNA5SP360-201ENST00000516555 118 ntBASIC5.52□□□□□ -1.53
TPM1P09493 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.52□□□□□ -1.53
TPM1P09493 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.52□□□□□ -1.53
TPM1P09493 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.52□□□□□ -1.53
TPM1P09493 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.52□□□□□ -1.53
TPM1P09493 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC5.52□□□□□ -1.53
TPM1P09493 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.52□□□□□ -1.53
TPM1P09493 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.52□□□□□ -1.53
TPM1P09493 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.52□□□□□ -1.53
TPM1P09493 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
TPM1P09493 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.52□□□□□ -1.53
TPM1P09493 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TPM1P09493 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.52□□□□□ -1.53
TPM1P09493 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.52□□□□□ -1.53
TPM1P09493 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TPM1P09493 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.52□□□□□ -1.53
TPM1P09493 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.52□□□□□ -1.53
TPM1P09493 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC5.52□□□□□ -1.53
TPM1P09493 AL691477.1-201ENST00000624398 162 ntBASIC5.52□□□□□ -1.53
TPM1P09493 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.52□□□□□ -1.53
TPM1P09493 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.52□□□□□ -1.53
TPM1P09493 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TPM1P09493 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TPM1P09493 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
TPM1P09493 DHX9P1-201ENST00000436565 3076 ntBASIC5.52□□□□□ -1.53
TPM1P09493 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.52□□□□□ -1.53
TPM1P09493 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TPM1P09493 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
TPM1P09493 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TPM1P09493 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
TPM1P09493 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TPM1P09493 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.51□□□□□ -1.53
TPM1P09493 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.51□□□□□ -1.53
TPM1P09493 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
TPM1P09493 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TPM1P09493 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
TPM1P09493 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TPM1P09493 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
TPM1P09493 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
TPM1P09493 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
TPM1P09493 RNA5SP339-201ENST00000390987 122 ntBASIC5.51□□□□□ -1.53
TPM1P09493 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.51□□□□□ -1.53
TPM1P09493 OR7E156P-201ENST00000400303 464 ntBASIC5.51□□□□□ -1.53
TPM1P09493 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.51□□□□□ -1.53
TPM1P09493 GABARAPL3-201ENST00000412799 354 ntBASIC5.51□□□□□ -1.53
TPM1P09493 CDY17P-201ENST00000414121 1282 ntBASIC5.51□□□□□ -1.53
TPM1P09493 SLC35E1P1-201ENST00000419313 864 ntBASIC5.51□□□□□ -1.53
TPM1P09493 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.51□□□□□ -1.53
TPM1P09493 RPS3P2-201ENST00000421346 701 ntBASIC5.51□□□□□ -1.53
TPM1P09493 AC093655.2-201ENST00000425735 631 ntBASIC5.51□□□□□ -1.53
TPM1P09493 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TPM1P09493 NMNAT1P2-201ENST00000435192 860 ntBASIC5.51□□□□□ -1.53
TPM1P09493 RPS26P2-201ENST00000440331 348 ntBASIC5.51□□□□□ -1.53
TPM1P09493 ARL4AP3-201ENST00000441452 574 ntBASIC5.51□□□□□ -1.53
TPM1P09493 AC064862.4-201ENST00000442180 334 ntBASIC5.51□□□□□ -1.53
TPM1P09493 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.51□□□□□ -1.53
TPM1P09493 RBMY2TP-201ENST00000451162 947 ntBASIC5.51□□□□□ -1.53
TPM1P09493 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.51□□□□□ -1.53
TPM1P09493 RANP1-206ENST00000455094 651 ntBASIC5.51□□□□□ -1.53
TPM1P09493 Z92846.1-201ENST00000456203 268 ntBASIC5.51□□□□□ -1.53
TPM1P09493 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.51□□□□□ -1.53
TPM1P09493 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.51□□□□□ -1.53
TPM1P09493 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TPM1P09493 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.51□□□□□ -1.53
TPM1P09493 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
TPM1P09493 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.51□□□□□ -1.53
TPM1P09493 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
TPM1P09493 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
TPM1P09493 AC107958.1-201ENST00000556576 290 ntBASIC5.51□□□□□ -1.53
TPM1P09493 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
TPM1P09493 CYCSP40-201ENST00000575927 294 ntBASIC5.51□□□□□ -1.53
TPM1P09493 MIR4271-201ENST00000582451 67 ntBASIC5.51□□□□□ -1.53
TPM1P09493 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.51□□□□□ -1.53
TPM1P09493 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.51□□□□□ -1.53
TPM1P09493 FO393422.1-201ENST00000603908 708 ntBASIC5.51□□□□□ -1.53
TPM1P09493 QTRT1P1-201ENST00000604344 1078 ntBASIC5.51□□□□□ -1.53
TPM1P09493 AC100767.2-201ENST00000604840 693 ntBASIC5.51□□□□□ -1.53
TPM1P09493 MIR6071-201ENST00000616741 78 ntBASIC5.51□□□□□ -1.53
TPM1P09493 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms