Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
APPP05067 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
APPP05067 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
APPP05067 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
APPP05067 RNA5SP394-201ENST00000364216 119 ntBASIC6.89□□□□□ -1.31
APPP05067 RNU1-59P-201ENST00000364829 162 ntBASIC6.89□□□□□ -1.31
APPP05067 GNG5P2-201ENST00000372054 207 ntBASIC6.89□□□□□ -1.31
APPP05067 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
APPP05067 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
APPP05067 MIR513B-201ENST00000385136 84 ntBASIC6.89□□□□□ -1.31
APPP05067 XKRYP4-201ENST00000414395 483 ntBASIC6.89□□□□□ -1.31
APPP05067 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC6.89□□□□□ -1.31
APPP05067 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.89□□□□□ -1.31
APPP05067 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC6.89□□□□□ -1.31
APPP05067 AC104843.2-201ENST00000427666 297 ntBASIC6.89□□□□□ -1.31
APPP05067 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.89□□□□□ -1.31
APPP05067 GAPDHP48-201ENST00000436626 961 ntBASIC6.89□□□□□ -1.31
APPP05067 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.89□□□□□ -1.31
APPP05067 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC6.89□□□□□ -1.31
APPP05067 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.89□□□□□ -1.31
APPP05067 XKRYP5-201ENST00000449659 483 ntBASIC6.89□□□□□ -1.31
APPP05067 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC6.89□□□□□ -1.31
APPP05067 SEPT7P3-201ENST00000455017 621 ntBASIC6.89□□□□□ -1.31
APPP05067 SETP20-201ENST00000457046 852 ntBASIC6.89□□□□□ -1.31
APPP05067 SNORD11.1-201ENST00000459482 85 ntBASIC6.89□□□□□ -1.31
APPP05067 AC020898.1-201ENST00000474167 787 ntBASIC6.89□□□□□ -1.31
APPP05067 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
APPP05067 PPIAP19-201ENST00000486414 492 ntBASIC6.89□□□□□ -1.31
APPP05067 AC009120.1-201ENST00000493458 473 ntBASIC6.89□□□□□ -1.31
APPP05067 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.89□□□□□ -1.31
APPP05067 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.89□□□□□ -1.31
APPP05067 HMGB1P42-201ENST00000532126 553 ntBASIC6.89□□□□□ -1.31
APPP05067 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC6.89□□□□□ -1.31
APPP05067 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.89□□□□□ -1.31
APPP05067 MTCYBP27-201ENST00000555160 670 ntBASIC6.89□□□□□ -1.31
APPP05067 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
APPP05067 AC096996.1-201ENST00000563813 325 ntBASIC6.89□□□□□ -1.31
APPP05067 NIFKP6-201ENST00000598115 845 ntBASIC6.89□□□□□ -1.31
APPP05067 AC018809.2-201ENST00000602436 3823 ntBASIC6.89□□□□□ -1.31
APPP05067 AC113368.1-201ENST00000603736 382 ntBASIC6.89□□□□□ -1.31
APPP05067 AC100847.1-201ENST00000611316 481 ntBASIC6.89□□□□□ -1.31
APPP05067 U1.25-201ENST00000614085 162 ntBASIC6.89□□□□□ -1.31
APPP05067 U1.34-201ENST00000618578 162 ntBASIC6.89□□□□□ -1.31
APPP05067 AC008115.4-201ENST00000619780 775 ntBASIC6.89□□□□□ -1.31
APPP05067 U1.31-201ENST00000620022 160 ntBASIC6.89□□□□□ -1.31
APPP05067 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
APPP05067 NF1-214ENST00000490416 1329 ntTSL 3 BASIC6.89□□□□□ -1.31
APPP05067 MFSD8-213ENST00000641134 1327 ntBASIC6.89□□□□□ -1.31
APPP05067 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.89□□□□□ -1.31
APPP05067 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.89□□□□□ -1.31
APPP05067 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.89□□□□□ -1.31
APPP05067 AL022311.1-201ENST00000623726 19416 ntBASIC6.89□□□□□ -1.31
APPP05067 AC079298.1-201ENST00000625026 1619 ntBASIC6.89□□□□□ -1.31
APPP05067 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.89□□□□□ -1.31
APPP05067 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.89□□□□□ -1.31
APPP05067 MTND5P11-201ENST00000511037 1812 ntBASIC6.89□□□□□ -1.31
APPP05067 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
APPP05067 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
APPP05067 AC011933.2-201ENST00000578539 2790 ntBASIC6.89□□□□□ -1.31
APPP05067 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.89□□□□□ -1.31
APPP05067 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
APPP05067 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.88□□□□□ -1.31
APPP05067 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.88□□□□□ -1.31
APPP05067 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
APPP05067 CASC19-260ENST00000641828 2001 ntBASIC6.88□□□□□ -1.31
APPP05067 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.88□□□□□ -1.31
APPP05067 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
APPP05067 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
APPP05067 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
APPP05067 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
APPP05067 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
APPP05067 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
APPP05067 AL159987.1-201ENST00000347911 293 ntBASIC6.88□□□□□ -1.31
APPP05067 RN7SKP292-201ENST00000365522 317 ntBASIC6.88□□□□□ -1.31
APPP05067 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.88□□□□□ -1.31
APPP05067 AC010385.1-201ENST00000412374 256 ntBASIC6.88□□□□□ -1.31
APPP05067 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC6.88□□□□□ -1.31
APPP05067 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.88□□□□□ -1.31
APPP05067 OR2X1P-201ENST00000421144 687 ntBASIC6.88□□□□□ -1.31
APPP05067 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.88□□□□□ -1.31
APPP05067 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.88□□□□□ -1.31
APPP05067 VTI1BP4-201ENST00000427516 527 ntBASIC6.88□□□□□ -1.31
APPP05067 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.88□□□□□ -1.31
APPP05067 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.88□□□□□ -1.31
APPP05067 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.88□□□□□ -1.31
APPP05067 AC000041.1-201ENST00000439655 175 ntBASIC6.88□□□□□ -1.31
APPP05067 AC064862.4-201ENST00000442180 334 ntBASIC6.88□□□□□ -1.31
APPP05067 AL161636.2-201ENST00000445179 927 ntBASIC6.88□□□□□ -1.31
APPP05067 HMGN1P36-201ENST00000446623 298 ntBASIC6.88□□□□□ -1.31
APPP05067 AC092155.2-201ENST00000454675 477 ntBASIC6.88□□□□□ -1.31
APPP05067 VN1R40P-201ENST00000455196 941 ntBASIC6.88□□□□□ -1.31
APPP05067 CREM-220ENST00000463314 964 ntTSL 2 BASIC6.88□□□□□ -1.31
APPP05067 RPS23P6-201ENST00000466136 431 ntBASIC6.88□□□□□ -1.31
APPP05067 RPS17P15-201ENST00000475609 349 ntBASIC6.88□□□□□ -1.31
APPP05067 AC116562.1-201ENST00000485355 781 ntBASIC6.88□□□□□ -1.31
APPP05067 AC134050.1-201ENST00000495088 933 ntBASIC6.88□□□□□ -1.31
APPP05067 AC105384.2-201ENST00000508433 640 ntBASIC6.88□□□□□ -1.31
APPP05067 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC6.88□□□□□ -1.31
APPP05067 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC6.88□□□□□ -1.31
APPP05067 IGLVIV-64-201ENST00000518581 301 ntBASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms