Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 MIR1184-1-201ENST00000408606 99 ntBASIC10.1□□□□□ -0.79
MYCNP04198 MIR1184-3-201ENST00000408676 99 ntBASIC10.1□□□□□ -0.79
MYCNP04198 TMEM139-202ENST00000409102 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
MYCNP04198 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC10.1□□□□□ -0.79
MYCNP04198 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC10.1□□□□□ -0.79
MYCNP04198 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC10.1□□□□□ -0.79
MYCNP04198 RPS6P12-201ENST00000432491 726 ntBASIC10.1□□□□□ -0.79
MYCNP04198 AL353997.1-201ENST00000432936 108 ntBASIC10.1□□□□□ -0.79
MYCNP04198 SPAG11A-205ENST00000434307 777 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
MYCNP04198 RPL21P112-201ENST00000434403 463 ntBASIC10.1□□□□□ -0.79
MYCNP04198 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC10.1□□□□□ -0.79
MYCNP04198 BX293535.1-201ENST00000443579 283 ntTSL 3 BASIC10.1□□□□□ -0.79
MYCNP04198 RN7SL368P-201ENST00000473384 277 ntBASIC10.1□□□□□ -0.79
MYCNP04198 AC098583.1-201ENST00000480875 255 ntBASIC10.1□□□□□ -0.79
MYCNP04198 RN7SL434P-201ENST00000495872 271 ntBASIC10.1□□□□□ -0.79
MYCNP04198 SOD1P3-201ENST00000518682 454 ntBASIC10.1□□□□□ -0.79
MYCNP04198 RANP3-201ENST00000530970 276 ntBASIC10.1□□□□□ -0.79
MYCNP04198 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC10.1□□□□□ -0.79
MYCNP04198 AC025252.2-201ENST00000537470 502 ntBASIC10.1□□□□□ -0.79
MYCNP04198 AP002892.2-201ENST00000544195 560 ntTSL 4 BASIC10.1□□□□□ -0.79
MYCNP04198 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC10.1□□□□□ -0.79
MYCNP04198 DUX4L52-201ENST00000549363 777 ntBASIC10.1□□□□□ -0.79
MYCNP04198 AC009997.1-201ENST00000557862 129 ntBASIC10.1□□□□□ -0.79
MYCNP04198 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC10.1□□□□□ -0.79
MYCNP04198 MIR6829-201ENST00000620375 67 ntBASIC10.1□□□□□ -0.79
MYCNP04198 snoMe28S-Am2634.2-201ENST00000637869 80 ntBASIC10.1□□□□□ -0.79
MYCNP04198 NBPF12-202ENST00000579935 5035 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
MYCNP04198 SPATA7-202ENST00000356583 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
MYCNP04198 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC10.1□□□□□ -0.79
MYCNP04198 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
MYCNP04198 RPA1-201ENST00000254719 4340 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
MYCNP04198 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
MYCNP04198 PRDM9-201ENST00000296682 3691 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
MYCNP04198 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
MYCNP04198 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC10.1□□□□□ -0.79
MYCNP04198 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
MYCNP04198 TRIM49D1-202ENST00000530311 2164 ntAPPRIS P2 TSL 5 BASIC10.09□□□□□ -0.79
MYCNP04198 DDX11L16-201ENST00000507418 1306 ntBASIC10.09□□□□□ -0.79
MYCNP04198 XRCC6P5-201ENST00000435236 1795 ntBASIC10.09□□□□□ -0.79
MYCNP04198 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
MYCNP04198 C17orf80-205ENST00000535032 2129 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
MYCNP04198 U91328.2-201ENST00000606723 4130 ntTSL 2 BASIC10.09□□□□□ -0.79
MYCNP04198 AC079466.1-201ENST00000587961 4453 ntTSL 2 BASIC10.09□□□□□ -0.79
MYCNP04198 AURKA-201ENST00000312783 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
MYCNP04198 APOL2-202ENST00000358502 2551 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
MYCNP04198 MICAL2-202ENST00000342902 3711 ntAPPRIS ALT2 TSL 2 BASIC10.09□□□□□ -0.79
MYCNP04198 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
MYCNP04198 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC10.09□□□□□ -0.79
MYCNP04198 RNU1-120P-201ENST00000363009 157 ntBASIC10.09□□□□□ -0.79
MYCNP04198 Y_RNA.183-201ENST00000363882 113 ntBASIC10.09□□□□□ -0.79
MYCNP04198 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
MYCNP04198 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
MYCNP04198 RNU6-121P-201ENST00000410525 99 ntBASIC10.09□□□□□ -0.79
MYCNP04198 RPS23P8-201ENST00000429775 330 ntBASIC10.09□□□□□ -0.79
MYCNP04198 AL353597.2-202ENST00000434901 373 ntBASIC10.09□□□□□ -0.79
MYCNP04198 AL133387.1-201ENST00000442188 382 ntTSL 3 BASIC10.09□□□□□ -0.79
MYCNP04198 AC023137.1-201ENST00000448241 308 ntTSL 4 BASIC10.09□□□□□ -0.79
MYCNP04198 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC10.09□□□□□ -0.79
MYCNP04198 AL157714.2-204ENST00000452283 973 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
MYCNP04198 PSMB3P2-201ENST00000457237 618 ntBASIC10.09□□□□□ -0.79
MYCNP04198 RNU7-169P-201ENST00000459456 61 ntBASIC10.09□□□□□ -0.79
MYCNP04198 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC10.09□□□□□ -0.79
MYCNP04198 AC011411.1-201ENST00000509592 876 ntBASIC10.09□□□□□ -0.79
MYCNP04198 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC10.09□□□□□ -0.79
MYCNP04198 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC10.09□□□□□ -0.79
MYCNP04198 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC10.09□□□□□ -0.79
MYCNP04198 CYCSP28-201ENST00000534284 321 ntBASIC10.09□□□□□ -0.79
MYCNP04198 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC10.09□□□□□ -0.79
MYCNP04198 OR7E159P-201ENST00000553761 298 ntBASIC10.09□□□□□ -0.79
MYCNP04198 LGALS9DP-201ENST00000580112 764 ntBASIC10.09□□□□□ -0.79
MYCNP04198 FAM95B1-209ENST00000590863 789 ntTSL 2 BASIC10.09□□□□□ -0.79
MYCNP04198 AC002059.1-201ENST00000608014 477 ntBASIC10.09□□□□□ -0.79
MYCNP04198 AL669942.1-201ENST00000611307 713 ntTSL 5 BASIC10.09□□□□□ -0.79
MYCNP04198 AL118522.2-201ENST00000616045 615 ntBASIC10.09□□□□□ -0.79
MYCNP04198 AC106782.7-201ENST00000624024 418 ntBASIC10.09□□□□□ -0.79
MYCNP04198 AC133555.5-201ENST00000624430 418 ntBASIC10.09□□□□□ -0.79
MYCNP04198 LL22NC03-63E9.3-201ENST00000407120 3111 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
MYCNP04198 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC10.09□□□□□ -0.79
MYCNP04198 PCDH19-203ENST00000420881 7936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
MYCNP04198 PABPC4L-201ENST00000421491 4944 ntAPPRIS P1 TSL 3 BASIC10.09□□□□□ -0.79
MYCNP04198 PPM1L-202ENST00000464260 2735 ntTSL 2 BASIC10.09□□□□□ -0.79
MYCNP04198 COL12A1-211ENST00000615798 11579 ntTSL 5 BASIC10.09□□□□□ -0.79
MYCNP04198 AC023283.1-201ENST00000453491 4897 ntTSL 3 BASIC10.09□□□□□ -0.79
MYCNP04198 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
MYCNP04198 BPNT1-203ENST00000414869 2357 ntTSL 2 BASIC10.09□□□□□ -0.79
MYCNP04198 DIAPH3-203ENST00000400319 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
MYCNP04198 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
MYCNP04198 ZNF432-201ENST00000221315 2577 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
MYCNP04198 KLHL7-AS1-201ENST00000419813 2564 ntTSL 2 BASIC10.09□□□□□ -0.79
MYCNP04198 ZNF30-206ENST00000601957 2583 ntTSL 2 BASIC10.09□□□□□ -0.79
MYCNP04198 ZBTB20-AS1-203ENST00000475939 1687 ntTSL 2 BASIC10.09□□□□□ -0.79
MYCNP04198 NOTCH2NL-203ENST00000578207 5042 ntAPPRIS P2 TSL 5 BASIC10.09□□□□□ -0.79
MYCNP04198 ATP9B-208ENST00000586722 1650 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
MYCNP04198 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
MYCNP04198 MLANA-203ENST00000381477 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
MYCNP04198 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC10.08□□□□□ -0.8
MYCNP04198 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC10.08□□□□□ -0.8
MYCNP04198 TRPC5-201ENST00000262839 5839 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
MYCNP04198 GIN1-201ENST00000399004 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
MYCNP04198 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms