Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 AC019084.1-201ENST00000457337 432 ntBASIC4.3□□□□□ -1.72
HLA-DQB1P01920 RN7SL168P-201ENST00000463821 279 ntBASIC4.3□□□□□ -1.72
HLA-DQB1P01920 RN7SL51P-201ENST00000468230 285 ntBASIC4.3□□□□□ -1.72
HLA-DQB1P01920 RPL37P23-201ENST00000492641 294 ntBASIC4.3□□□□□ -1.72
HLA-DQB1P01920 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.3□□□□□ -1.72
HLA-DQB1P01920 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DQB1P01920 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DQB1P01920 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DQB1P01920 IGKV2-4-201ENST00000523070 340 ntBASIC4.3□□□□□ -1.72
HLA-DQB1P01920 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC4.3□□□□□ -1.72
HLA-DQB1P01920 AC069240.1-201ENST00000548774 375 ntBASIC4.3□□□□□ -1.72
HLA-DQB1P01920 RBM22P1-201ENST00000578589 1214 ntBASIC4.3□□□□□ -1.72
HLA-DQB1P01920 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-DQB1P01920 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC4.3□□□□□ -1.72
HLA-DQB1P01920 AC104687.2-201ENST00000604442 342 ntBASIC4.3□□□□□ -1.72
HLA-DQB1P01920 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.3□□□□□ -1.72
HLA-DQB1P01920 MIR6780B-201ENST00000610307 79 ntBASIC4.3□□□□□ -1.72
HLA-DQB1P01920 AC015813.4-201ENST00000610469 179 ntBASIC4.3□□□□□ -1.72
HLA-DQB1P01920 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DQB1P01920 SNX18P1Y-201ENST00000616231 511 ntBASIC4.3□□□□□ -1.72
HLA-DQB1P01920 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC4.3□□□□□ -1.72
HLA-DQB1P01920 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-DQB1P01920 AC009950.2-201ENST00000636548 183 ntBASIC4.3□□□□□ -1.72
HLA-DQB1P01920 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-DQB1P01920 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
HLA-DQB1P01920 AL672167.1-203ENST00000641299 2975 ntBASIC4.3□□□□□ -1.72
HLA-DQB1P01920 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DQB1P01920 MAPK10-320ENST00000641462 6696 ntBASIC4.3□□□□□ -1.72
HLA-DQB1P01920 AP001002.1-201ENST00000625148 1513 ntBASIC4.3□□□□□ -1.72
HLA-DQB1P01920 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DQB1P01920 TLK1P1-201ENST00000456760 2440 ntBASIC4.3□□□□□ -1.72
HLA-DQB1P01920 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DQB1P01920 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.29□□□□□ -1.72
HLA-DQB1P01920 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DQB1P01920 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DQB1P01920 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DQB1P01920 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DQB1P01920 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
HLA-DQB1P01920 AC068254.2-201ENST00000623938 3577 ntBASIC4.29□□□□□ -1.72
HLA-DQB1P01920 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
HLA-DQB1P01920 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DQB1P01920 LAP3P1-201ENST00000403648 294 ntBASIC4.29□□□□□ -1.72
HLA-DQB1P01920 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.29□□□□□ -1.72
HLA-DQB1P01920 AL445213.1-201ENST00000412589 747 ntBASIC4.29□□□□□ -1.72
HLA-DQB1P01920 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DQB1P01920 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.29□□□□□ -1.72
HLA-DQB1P01920 RPS4XP16-201ENST00000427198 791 ntBASIC4.29□□□□□ -1.72
HLA-DQB1P01920 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.29□□□□□ -1.72
HLA-DQB1P01920 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DQB1P01920 AC073052.1-201ENST00000440417 714 ntBASIC4.29□□□□□ -1.72
HLA-DQB1P01920 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DQB1P01920 ATP5G1P3-201ENST00000463301 410 ntBASIC4.29□□□□□ -1.72
HLA-DQB1P01920 AC010469.1-201ENST00000463864 576 ntBASIC4.29□□□□□ -1.72
HLA-DQB1P01920 RPL23AP65-201ENST00000475608 468 ntBASIC4.29□□□□□ -1.72
HLA-DQB1P01920 RN7SL799P-201ENST00000475891 298 ntBASIC4.29□□□□□ -1.72
HLA-DQB1P01920 RNA5SP392-201ENST00000516905 112 ntBASIC4.29□□□□□ -1.72
HLA-DQB1P01920 HMGB1P40-201ENST00000525121 540 ntBASIC4.29□□□□□ -1.72
HLA-DQB1P01920 EIF4EP5-201ENST00000528228 640 ntBASIC4.29□□□□□ -1.72
HLA-DQB1P01920 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.29□□□□□ -1.72
HLA-DQB1P01920 AC024405.1-201ENST00000532521 1042 ntBASIC4.29□□□□□ -1.72
HLA-DQB1P01920 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
HLA-DQB1P01920 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.29□□□□□ -1.72
HLA-DQB1P01920 MTND6P33-201ENST00000571794 183 ntBASIC4.29□□□□□ -1.72
HLA-DQB1P01920 MIR1273E-201ENST00000581165 102 ntBASIC4.29□□□□□ -1.72
HLA-DQB1P01920 AL357153.4-201ENST00000620487 1016 ntBASIC4.29□□□□□ -1.72
HLA-DQB1P01920 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.29□□□□□ -1.72
HLA-DQB1P01920 AC135068.12-201ENST00000637370 931 ntBASIC4.29□□□□□ -1.72
HLA-DQB1P01920 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.29□□□□□ -1.72
HLA-DQB1P01920 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.29□□□□□ -1.72
HLA-DQB1P01920 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
HLA-DQB1P01920 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DQB1P01920 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.29□□□□□ -1.72
HLA-DQB1P01920 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
HLA-DQB1P01920 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DQB1P01920 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.29□□□□□ -1.72
HLA-DQB1P01920 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
HLA-DQB1P01920 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DQB1P01920 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DQB1P01920 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DQB1P01920 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
HLA-DQB1P01920 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.28□□□□□ -1.72
HLA-DQB1P01920 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DQB1P01920 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC4.28□□□□□ -1.72
HLA-DQB1P01920 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DQB1P01920 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.28□□□□□ -1.72
HLA-DQB1P01920 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.28□□□□□ -1.72
HLA-DQB1P01920 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DQB1P01920 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DQB1P01920 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DQB1P01920 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DQB1P01920 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DQB1P01920 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4.28□□□□□ -1.72
HLA-DQB1P01920 RN7SKP240-201ENST00000410583 375 ntBASIC4.28□□□□□ -1.72
HLA-DQB1P01920 RN7SKP247-201ENST00000411094 308 ntBASIC4.28□□□□□ -1.72
HLA-DQB1P01920 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.28□□□□□ -1.72
HLA-DQB1P01920 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.28□□□□□ -1.72
HLA-DQB1P01920 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.28□□□□□ -1.72
HLA-DQB1P01920 SDHDP6-201ENST00000414693 480 ntBASIC4.28□□□□□ -1.72
HLA-DQB1P01920 EI24P4-201ENST00000423683 1078 ntBASIC4.28□□□□□ -1.72
HLA-DQB1P01920 AC092162.1-201ENST00000432828 434 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms