Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
PEX1O43933 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
PEX1O43933 AL354854.1-201ENST00000455940 1363 ntBASIC5.68□□□□□ -1.5
PEX1O43933 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PEX1O43933 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
PEX1O43933 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
PEX1O43933 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
PEX1O43933 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PEX1O43933 Y_RNA.169-201ENST00000363745 96 ntBASIC5.68□□□□□ -1.5
PEX1O43933 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.68□□□□□ -1.5
PEX1O43933 RNA5SP156-201ENST00000410250 110 ntBASIC5.68□□□□□ -1.5
PEX1O43933 MYL6P5-201ENST00000412707 459 ntBASIC5.68□□□□□ -1.5
PEX1O43933 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.68□□□□□ -1.5
PEX1O43933 USP9YP11-201ENST00000427537 717 ntBASIC5.68□□□□□ -1.5
PEX1O43933 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.68□□□□□ -1.5
PEX1O43933 AC023141.3-201ENST00000436698 278 ntBASIC5.68□□□□□ -1.5
PEX1O43933 ATP5LP2-201ENST00000440646 311 ntBASIC5.68□□□□□ -1.5
PEX1O43933 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.68□□□□□ -1.5
PEX1O43933 RAB28P3-201ENST00000448325 597 ntBASIC5.68□□□□□ -1.5
PEX1O43933 NPM1P19-201ENST00000450070 712 ntBASIC5.68□□□□□ -1.5
PEX1O43933 AC002553.3-201ENST00000453002 341 ntBASIC5.68□□□□□ -1.5
PEX1O43933 CBX1P2-201ENST00000453841 458 ntBASIC5.68□□□□□ -1.5
PEX1O43933 RPSAP37-201ENST00000470913 821 ntBASIC5.68□□□□□ -1.5
PEX1O43933 BET1P1-201ENST00000482276 359 ntBASIC5.68□□□□□ -1.5
PEX1O43933 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PEX1O43933 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC5.68□□□□□ -1.5
PEX1O43933 CCDC11P1-201ENST00000503137 1162 ntBASIC5.68□□□□□ -1.5
PEX1O43933 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.68□□□□□ -1.5
PEX1O43933 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.68□□□□□ -1.5
PEX1O43933 GAPDHP71-201ENST00000511530 1003 ntBASIC5.68□□□□□ -1.5
PEX1O43933 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.68□□□□□ -1.5
PEX1O43933 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.68□□□□□ -1.5
PEX1O43933 PRMT5P1-201ENST00000514351 598 ntBASIC5.68□□□□□ -1.5
PEX1O43933 IGKV3D-25-201ENST00000519599 235 ntBASIC5.68□□□□□ -1.5
PEX1O43933 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.68□□□□□ -1.5
PEX1O43933 AC087373.1-201ENST00000524920 491 ntBASIC5.68□□□□□ -1.5
PEX1O43933 AP001858.2-201ENST00000536213 601 ntBASIC5.68□□□□□ -1.5
PEX1O43933 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.68□□□□□ -1.5
PEX1O43933 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.68□□□□□ -1.5
PEX1O43933 AC079905.1-201ENST00000549280 475 ntBASIC5.68□□□□□ -1.5
PEX1O43933 ZNF971P-201ENST00000562068 1249 ntBASIC5.68□□□□□ -1.5
PEX1O43933 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.68□□□□□ -1.5
PEX1O43933 AP005136.1-201ENST00000579765 429 ntBASIC5.68□□□□□ -1.5
PEX1O43933 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.68□□□□□ -1.5
PEX1O43933 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.68□□□□□ -1.5
PEX1O43933 Z82195.1-201ENST00000604558 398 ntBASIC5.68□□□□□ -1.5
PEX1O43933 PART1_2.1-201ENST00000612397 250 ntBASIC5.68□□□□□ -1.5
PEX1O43933 AC092140.2-201ENST00000618027 521 ntBASIC5.68□□□□□ -1.5
PEX1O43933 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PEX1O43933 AP001962.1-201ENST00000624114 559 ntBASIC5.68□□□□□ -1.5
PEX1O43933 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.68□□□□□ -1.5
PEX1O43933 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PEX1O43933 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PEX1O43933 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
PEX1O43933 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PEX1O43933 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PEX1O43933 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PEX1O43933 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PEX1O43933 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
PEX1O43933 Z98755.1-201ENST00000407015 1384 ntBASIC5.67□□□□□ -1.5
PEX1O43933 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PEX1O43933 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PEX1O43933 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
PEX1O43933 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PEX1O43933 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PEX1O43933 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PEX1O43933 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PEX1O43933 SNORA21-201ENST00000362423 132 ntBASIC5.67□□□□□ -1.5
PEX1O43933 RNU1-134P-201ENST00000362935 165 ntBASIC5.67□□□□□ -1.5
PEX1O43933 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PEX1O43933 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.67□□□□□ -1.5
PEX1O43933 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PEX1O43933 MIR130B-202ENST00000385018 82 ntBASIC5.67□□□□□ -1.5
PEX1O43933 EI24P3-201ENST00000399046 1062 ntBASIC5.67□□□□□ -1.5
PEX1O43933 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC5.67□□□□□ -1.5
PEX1O43933 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC5.67□□□□□ -1.5
PEX1O43933 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PEX1O43933 USP9YP21-201ENST00000420603 432 ntBASIC5.67□□□□□ -1.5
PEX1O43933 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.67□□□□□ -1.5
PEX1O43933 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.67□□□□□ -1.5
PEX1O43933 CRIP1P1-201ENST00000427567 185 ntBASIC5.67□□□□□ -1.5
PEX1O43933 AL160175.1-201ENST00000428124 247 ntBASIC5.67□□□□□ -1.5
PEX1O43933 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.67□□□□□ -1.5
PEX1O43933 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.67□□□□□ -1.5
PEX1O43933 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC5.67□□□□□ -1.5
PEX1O43933 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
PEX1O43933 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PEX1O43933 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC5.67□□□□□ -1.5
PEX1O43933 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC5.67□□□□□ -1.5
PEX1O43933 PTGES3P5-201ENST00000455109 434 ntBASIC5.67□□□□□ -1.5
PEX1O43933 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.67□□□□□ -1.5
PEX1O43933 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PEX1O43933 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.67□□□□□ -1.5
PEX1O43933 AC092691.2-201ENST00000461787 803 ntBASIC5.67□□□□□ -1.5
PEX1O43933 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.67□□□□□ -1.5
PEX1O43933 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC5.67□□□□□ -1.5
PEX1O43933 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.67□□□□□ -1.5
PEX1O43933 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.67□□□□□ -1.5
PEX1O43933 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.67□□□□□ -1.5
PEX1O43933 RN7SKP288-201ENST00000516227 268 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms