Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 KYNUP3-201ENST00000574386 1341 ntBASIC5.65□□□□□ -1.51
PROM1O43490 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PROM1O43490 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.51
PROM1O43490 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
PROM1O43490 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PROM1O43490 AL606537.1-201ENST00000607258 2011 ntBASIC5.65□□□□□ -1.51
PROM1O43490 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
PROM1O43490 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.65□□□□□ -1.51
PROM1O43490 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PROM1O43490 AC012254.3-201ENST00000591183 2117 ntBASIC5.65□□□□□ -1.51
PROM1O43490 AC093225.1-201ENST00000506867 1408 ntBASIC5.65□□□□□ -1.51
PROM1O43490 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
PROM1O43490 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
PROM1O43490 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
PROM1O43490 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
PROM1O43490 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PROM1O43490 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.64□□□□□ -1.51
PROM1O43490 LYARP1-201ENST00000436977 1501 ntBASIC5.64□□□□□ -1.51
PROM1O43490 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PROM1O43490 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PROM1O43490 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PROM1O43490 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.64□□□□□ -1.51
PROM1O43490 RN7SKP81-201ENST00000365603 331 ntBASIC5.64□□□□□ -1.51
PROM1O43490 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PROM1O43490 RNU6-636P-201ENST00000384598 107 ntBASIC5.64□□□□□ -1.51
PROM1O43490 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.64□□□□□ -1.51
PROM1O43490 AL391422.1-201ENST00000402155 436 ntBASIC5.64□□□□□ -1.51
PROM1O43490 RPL10P10-201ENST00000403509 664 ntBASIC5.64□□□□□ -1.51
PROM1O43490 AL096711.1-201ENST00000404780 554 ntBASIC5.64□□□□□ -1.51
PROM1O43490 RN7SKP278-201ENST00000410504 342 ntBASIC5.64□□□□□ -1.51
PROM1O43490 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC5.64□□□□□ -1.51
PROM1O43490 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC5.64□□□□□ -1.51
PROM1O43490 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC5.64□□□□□ -1.51
PROM1O43490 USP9YP21-201ENST00000420603 432 ntBASIC5.64□□□□□ -1.51
PROM1O43490 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC5.64□□□□□ -1.51
PROM1O43490 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
PROM1O43490 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC5.64□□□□□ -1.51
PROM1O43490 LYPLA1P1-201ENST00000434514 622 ntBASIC5.64□□□□□ -1.51
PROM1O43490 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.64□□□□□ -1.51
PROM1O43490 RPS7P3-201ENST00000443360 580 ntBASIC5.64□□□□□ -1.51
PROM1O43490 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.64□□□□□ -1.51
PROM1O43490 AC005077.1-201ENST00000449226 375 ntBASIC5.64□□□□□ -1.51
PROM1O43490 PPIAP27-201ENST00000453800 265 ntBASIC5.64□□□□□ -1.51
PROM1O43490 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC5.64□□□□□ -1.51
PROM1O43490 AC023194.2-201ENST00000465398 406 ntBASIC5.64□□□□□ -1.51
PROM1O43490 RN7SL269P-201ENST00000467795 305 ntBASIC5.64□□□□□ -1.51
PROM1O43490 AC090602.1-201ENST00000469695 252 ntBASIC5.64□□□□□ -1.51
PROM1O43490 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.64□□□□□ -1.51
PROM1O43490 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.64□□□□□ -1.51
PROM1O43490 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.64□□□□□ -1.51
PROM1O43490 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.64□□□□□ -1.51
PROM1O43490 RPA2P1-201ENST00000556557 721 ntBASIC5.64□□□□□ -1.51
PROM1O43490 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.64□□□□□ -1.51
PROM1O43490 AC106734.1-201ENST00000568646 663 ntBASIC5.64□□□□□ -1.51
PROM1O43490 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.64□□□□□ -1.51
PROM1O43490 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.64□□□□□ -1.51
PROM1O43490 Z99497.2-201ENST00000603634 310 ntBASIC5.64□□□□□ -1.51
PROM1O43490 AC079610.2-201ENST00000604818 690 ntBASIC5.64□□□□□ -1.51
PROM1O43490 AC109309.2-201ENST00000612597 332 ntBASIC5.64□□□□□ -1.51
PROM1O43490 AL355974.3-201ENST00000617383 467 ntBASIC5.64□□□□□ -1.51
PROM1O43490 AC015722.2-201ENST00000622210 551 ntBASIC5.64□□□□□ -1.51
PROM1O43490 AL136228.1-201ENST00000622221 319 ntBASIC5.64□□□□□ -1.51
PROM1O43490 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.64□□□□□ -1.51
PROM1O43490 OR8G3P-202ENST00000641572 1255 ntBASIC5.64□□□□□ -1.51
PROM1O43490 HSPD1P11-201ENST00000508643 1702 ntBASIC5.64□□□□□ -1.51
PROM1O43490 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
PROM1O43490 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PROM1O43490 AC092451.3-201ENST00000625067 1343 ntBASIC5.64□□□□□ -1.51
PROM1O43490 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PROM1O43490 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PROM1O43490 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.64□□□□□ -1.51
PROM1O43490 AC130304.1-201ENST00000622942 2385 ntBASIC5.64□□□□□ -1.51
PROM1O43490 MTCO1P11-201ENST00000429111 1528 ntBASIC5.64□□□□□ -1.51
PROM1O43490 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PROM1O43490 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PROM1O43490 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.63□□□□□ -1.51
PROM1O43490 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.63□□□□□ -1.51
PROM1O43490 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
PROM1O43490 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PROM1O43490 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
PROM1O43490 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PROM1O43490 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
PROM1O43490 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PROM1O43490 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PROM1O43490 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.63□□□□□ -1.51
PROM1O43490 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PROM1O43490 RNA5SP211-201ENST00000365516 117 ntBASIC5.63□□□□□ -1.51
PROM1O43490 HMGB1P10-201ENST00000395823 563 ntBASIC5.63□□□□□ -1.51
PROM1O43490 RNU2-17P-201ENST00000410290 190 ntBASIC5.63□□□□□ -1.51
PROM1O43490 HMGB1P49-201ENST00000418882 569 ntBASIC5.63□□□□□ -1.51
PROM1O43490 AC099677.3-201ENST00000427081 395 ntBASIC5.63□□□□□ -1.51
PROM1O43490 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC5.63□□□□□ -1.51
PROM1O43490 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC5.63□□□□□ -1.51
PROM1O43490 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC5.63□□□□□ -1.51
PROM1O43490 ATP5LP2-201ENST00000440646 311 ntBASIC5.63□□□□□ -1.51
PROM1O43490 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.63□□□□□ -1.51
PROM1O43490 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
PROM1O43490 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
PROM1O43490 MTND1P29-201ENST00000448112 647 ntBASIC5.63□□□□□ -1.51
PROM1O43490 CFL1P4-201ENST00000451536 498 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 140 ms